Cucurbita maxima (winter squash): 111470054
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Entry
111470054 CDS
T05246
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111470054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111470054
Enzymes [BR:
cmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111470054
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111470054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TCAD3
Motif
Other DBs
NCBI-GeneID:
111470054
NCBI-ProteinID:
XP_022971295
UniProt:
A0A6J1I5C4
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MAQTTEGASESVKAVAFSFMTEDEVRKLSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDE
TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKC
ASQLELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLK
PKQRECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEE
NTVPQTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSTVHLLPSEVKHILKRLW
KNEAMLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNK
VLQSNISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKK
EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAI
INGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIV
NRHLEDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHF
PQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLY
SSGISTSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGA
PPFCVEKDVKIPRGFFKCRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKK
DDYSKFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSV
MSRLFTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDP
MALQLNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLM
TTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLT
GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQF
RYGEDGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS
FAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESME
VTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEM
LLLSRISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKL
RTTDEMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTVIIDV
SKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVAAKGNHFEVHFKFTNEPHILLTQIAQ
RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKT
LWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADY
MTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPV
KMGTGSFDLMQKIDV
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccacagagggtgcgtccgagtcagtaaaggcggttgccttcagcttcatg
actgaagacgaggttcgcaaactcagtgctgtaaaagttactgcacccatattgttagat
gctatgggcaggcccgtagctggcggactttatgatccagccatgggttctttagatgag
acaacactttgcaaatcttgcggacaaaggcctttctactgccccggtcattgtggtcac
attgaccttgtttctccagtgtataatcccttgctatttattattctccataatcttcta
caacgcacttgtttctcgtgccaccattttcgggctggcggatcccaggttgaaaaatgt
gcatctcaactggagcttattttaaatggtgatgttgttaaggcgaaagagttggattca
gaattgctaactgagtcttcagattcaaagcatagcaatgaaatgcagaatatgcaacca
aaaaaatggacctctcttcaattttctgaggccatatctgctgtgaataaatttttgaag
cccaaacagagagagtgcaaaaattgtggtgccaaaaatcctaagattactagaccaact
tttggttggcttcacatgactggcttgccaggagcccacaagagggccaatgctattaga
ggatgcaagcctgcgagtgtgagtagtggggctgaaggaatatcctcaattgaggaagag
aatacggttccgcaaactactgttatcaatatgtcggaagtagatgtatttgatgacact
gcaaccaaggcctctgtagaagattctgaggaagtttctcctgaaatttttgtgccaaag
aatttctccacagtccatttgttgccgtctgaggttaagcatattttgaagcgtttgtgg
aaaaatgaagctatgctctgttcgtttattagtgatattcagcatcagggatatggaaat
aaagcaggccactccatgtttttcttagaggctgttctagtccctccaattaagttccgc
ccccctgcaaaaggaggcgattctataatggagcatcctcaaactgtgttactgaacaag
gtgctacagtccaatatatcattaggaaatgctcatgctaacaaatcagaacactcaaag
atagtcaggctatggatggatcttcaacaatctatcaatgttttgtttgatagcaaaact
gcatctggtccaggtcaaaaagatgtttctgtgggaatatgtcagttattggagaagaag
gaaggcatgtttcgtcagaagatgatgggaaagagggttaactttgcgtgccgatctgtc
atttcaccagatccctacttagcagttaatgagattggaattccaccttattttgcattg
agattgacctatccggagagagtgactgcttggaatgttcaaaagttacgaaatgctata
attaatggtcctgaaacccatccaggagccacacattacattgataagttagctacagtt
aagttgaacttgaagccaagtcggaaatcacgcatttctatctcaaggaaattaccttcc
tctcgtggagtggttgtcgatcaaggaagtgatgattatgaatttgaagggaaaattgtg
aatcgccatttggaagatggagatattgttcttgtaaatcgacagcctacacttcacaag
cctagtattatggctcatgttgttcgtgtcttaaaaggagagaagactattcgaatgcac
tatgcaaattgcagcacgtataatgctgattttgatggtgatgaaatgaacgttcatttt
cctcaagatgaaatttctcgtgctgaagcttacaacattgtgaatgcaaataaccaatat
gtgaaacccaccagtggtgaaccaatcagagcattaattcaggaccacattataagtgct
gtgcttctcacgaagaaggatactttcttaaaatttgatgagtttagccagcttctctat
agttctggcatttcaacatccagaccatgtgcttcttcagagaaacctgggcagaagatt
ttcattttagattttgaatctgagatgctacctgttcttcctgccgtatggaaaccagag
cctctttggacaggaaaacaggttgtcacagccttattggaccatatcactagaggggcc
ccaccattttgtgtagaaaaagatgtgaaaattccacgtggtttttttaagtgcagacat
acgggaaataattcttccaaagtcaaagtggccgatggtgataaatcgaagagaaaaaga
acttggaatggaattaagttgggaaaaggagaagttcctgatgaagggaactctaaaaaa
gatgattactcaaaatttgataaattgaaggcagagcgtttagatgacgatagcttacta
atatttaaaaatgaattggtgcgtggtgtcatagacaaggctcaatttggtgactatggc
ttagtgcatacagtgcaggagctttatggttcaaatactgctggcgtcttgctttctgta
atgagtcgtttgttcactgtttatcttcagatgcatgggttcacatgtggagtagatgat
cttttgttgatacaatgtatggacaaggagagagagaagcaactccaaatctgcgagaat
atcggtgaacaggtgcatcttggatttcttaaggttaaagatggagaaaaattagatcca
atggcactgcagttgaatattgaaaaaactatttccaataatggagagccagcattaaca
tcattggatagaaaaatgaccagccaacttaatgaaaggactggtaactctaaggtcctc
aaagatttgttgtctgagggcttgctaaaaccctctgtaaacaactgcatttctctgatg
acgacttctggggctaaaggtggtacggcaaattttcaacaaatatcttcacatttaggc
cagcagcagttagaaggcaaacgagttcctagaatggtgtcaggaaaaacattaccctgc
tttccgccttgggattgggcatcacgagctggagggttcattgttgatcgctttcttact
ggtcttcgacctcaagaatactacttccattgtatggctggccgtgaagggttggttgat
acagcagttaagacatctcggagtggatatctacaaagatgccttattaaaaatctggag
tctctaaaagttggttacgatcatactgttcgtgatgcagatggctccattattcaattt
cgttatggcgaggatggtgtagatgtccataaaaatgcctttattataaaatttgaagca
cttgcagctaactgcgaaatgatctaccaaaaaagtcatcatcagcctgacagctttaat
caatacatcaatgagctgccttcagttcttcaagagaaagcagaagtcatatataattcc
tttgcgaaggataaggctcctggtctgggacaaaaagatgactttatccggctgctggag
aataagtacctgtcaagtcttgcacagcctggagaaccagttggtgtactcgctgctcag
tctatcggagagccatcaacacaaatgacgttgaacacatttcatcatgctgggcgtggt
gagatgaatgtgactcttggaattccccgccttcaagagattttgatgactgcttcacaa
gatattaagacaccaattatgacatgcccattgcgagagggctactcaatggatgatgca
aagtgtcttgctaataagttgaagaaaattacagtagctgacataatagaaagtatggaa
gtaactgttgtgccattttcgcaacggaagcgagagatatgtagtatttataagcttgaa
ataagattttacccacttgaaagtaatccacagcatgctcatgtatcttcagaagatttg
gaagaaattttggaatttgtgttcgttagggagttggaagattcaatccaaaatgaaatg
ctcttactatcacgaattagtggtataaaaaattttgtgcctgactcacaatcaaagggt
ttgagtgaaagcgataaagtaagtagctcacaacgtgaagaaaatgatgatgatgatgat
gttggcaatgacttagatgttgctgaagatcttggttttgacatgaagaaacaaaaactt
cgaactactgatgagatggattatgaagatgattcggaagaggaactcaatgtgaaagaa
ccatcagcaggatttgaaagtgaagttgatcaaggtgatgaggctgatataaccaatgat
gatacgatggaaattgttaaagacgctacatctgaggatcagactgtgataatagatgtc
tcaaagtccaattcgaaagggaaaacaaccaaaacatcaaacaaaaagaagaaagctaaa
tcagaattctccagaaaggactatgatagagcaatttttgtggcagcgaagggaaatcat
tttgaagtccattttaagtttaccaatgaacctcatattttactgacgcagattgctcag
agaacggcccagaaggtgtctatccaaagctctggcaaaatcatccgctgtcaacaaatt
acttgcaaggaaggtcaggtaatataccacgggaatgatattaaggtaagaaagaatatc
aaaccagaagaaaaggaaaaagttcctgcattgcagacgactggagtcgactttaaaacg
ctctgggagttacaagatgagcttgatgctagatatatatattccaatgacattcatgcc
atgctacaaacatatggagtggaagctgctagggaaacaataataagagaaattcgaaac
attttcagttcatatgggatatcagtcaatattagacatctaactctaattgctgattat
atgactcattctggtgggtaccgaccaatgaatcgattaggaggcatagccgactcgata
tctcctttcagtcgaatgacttttgagacggctgcaaggttcattgttcaagctgcatac
catggggaagtagacaccttggaaactccatctgctagaatctgtcttggtttgccagta
aagatgggaaccggtagttttgatttgatgcagaaaatcgatgtctga
DBGET
integrated database retrieval system
