KEGG   Cucurbita maxima (winter squash): 111470884
Entry
111470884         CDS       T05246                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03020  RNA polymerase
cmax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111470884
  09124 Replication and repair
   03420 Nucleotide excision repair
    111470884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111470884
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111470884
Transcription machinery [BR:cmax03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111470884
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111470884
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 111470884
NCBI-ProteinID: XP_022972305
UniProt: A0A6J1I879
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttttgccgggaatgtaacaacattctctatccgaaggaggatagg
gatgagaagattcttctctatgcgtgtcgcaactgtgatcaccaggaagttgctgacaat
aactgtgtctataggaatgagattcatcatgccgtaggggaacgcactcaagttctgcaa
gatgttgctgcggatccaacgctccctcgcacaaaagctgtccgatgtgctcaatgcaac
catggagaagctgttttcttccaggccactgccagaggggaggaaggtatgacattattc
ttcgtttgctgcaatccaaattgtggtcacaggtggagagattga

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