KEGG   Cucurbita maxima (winter squash): 111480863
Entry
111480863         CDS       T05246                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111480863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111480863
Enzymes [BR:cmax01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111480863
Transcription machinery [BR:cmax03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111480863
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 111480863
NCBI-ProteinID: XP_022981836
UniProt: A0A6J1IXN3
LinkDB
Position
Unknown
AA seq 1193 aa
MGTSGAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEVFLKDFCKKSSMAFFDE
YGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP
KFWGGAASGKEYNLLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDKD
LLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRR
LWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
GVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTSF
PPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAG
ELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAHS
FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPD
GENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHKIFLNGEWVGVC
EDSLSFVTKVRLKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSK
GESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSCG
LVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLG
TPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSYK
AEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
ADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLE
SQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDA
ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL
TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVIQ
RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggggacatcaggcgcaaaggacgatatagagatgaatagcgagccggaagacttatca
cctggaactgatatggatacagacgatgatgattattctgagccagtcaacattcatgat
ctaggtgaagtatttttaaaggatttctgtaagaagtcatcaatggcattttttgatgag
tacggccttatcagtcaccaacttaactcgtacaatgacttcataaaaagtggcattcag
aagtcctttgattactttggtgagatcgtagttcagccaggatatgacccctcaaagaaa
ggagatggagaatggagatatgcttcagtgaagtttggcaaggtaactcttgataagcca
aagttctggggtggtgcagcaagtggaaaagagtataacttgcttcctaggcacgctcga
ctacagaacatgacttattcctcaaggatgaaaatgaatattaatgtagaggtgtatact
caaaggttagtcagaagtgataaattcaaaactggacaagatcaatatgtcgacaaggat
ctcttaagtcaagataacagggatatatttataggcaggctacctgtgatggtgaattct
gacctttgctggatgaaggatgatcagaaacgtgactgcgaatttgatcatggaggttat
tttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatttgtttgagaaga
ctctggatttctaataatcaaggttggactgtggcatatagatcagaagttaagagaaat
agactaattattagactagttgaaaattccaagtctgaagaactaaaaagcaaggagaaa
gtcctcaatgtatatttcttgtctacagaaattcctgtgtggattttattctttgcactt
ggtgtttcttcggacagagaaatagtagatttaatcgactttggcagagaggatccaact
gttttgaatattctctttgcctctgttcgtgtagtcgataatgatgataagtggaaagac
tttcgaagaggtaaaagagctctgaattttttggagaatgaggttaaaaagacgagcttc
ccacctgctgaaaaaattgaagattgcttgaacctttatctttttgccagcttgaaaggc
ttaaagcagaagtgtcgtttccttggttatatggttaaatgtctcctgcaagcctatact
ggccgtaggaaatgtgataatagggatgatttccgcaataagaggtttgagttggctgga
gaattgcttgaaagagagattaaagtacatattgcacatgcacgtaggcgtatggaaaag
gctctgcaaagggacctctatggagatcgtgatgtgcgtccaattgaacactattttgat
gcttccataatcactaatggtctatcccgagcattctctactggagcatgggcacattca
ttcaagaggatggaaagaatttcaggtgtggtggcaacgcttggtcgtgctaatcccctg
cagacaatggctgaattgaggagaacacgtcaacaggttgcatacactgggaaagttggt
gatgctagatacccgcatccttctcactggggaagggtttgctttctctccaccccggat
ggtgaaaattgtgggcttattaaaaatttgtccatcacaggacttgtaagcttaaacaca
ttgaagcccgtagttcccaccttgtttcgttgtgggatggagaatgtggtggacgataca
tctacttctcttagtgggaagcacaaaatttttctcaatggggaatgggttggagtttgt
gaagattccctttcatttgtaacgaaagtgagactcaagcggcgaaggaatctgttactg
catcaggtagaagtcaaaagagatgaacaactgaaagaagtacgtatattttccgatgct
ggaaggatattacgtcctctcttagttgtagagaacttaaacaggattgataaatctaag
ggggaaagctacacttttcaatcccttttggacaagggaataattgaacttattggaact
gaagaagaagaagactgtcgtacagcttggagtattaagcatcttacggaagatcaaggg
acttcgaaatatacccattgtgagctggatacgtcatttttattaggtttaagctgtgga
cttgtcccgtttgcaaatcatgaccatgctaggagggctctatttcaatcccagaaacac
tctaatcaagctattggattttcaacaaccaattctaattttcgtgtagatactttatct
caccagttacactatccacaaaggccgctttttcgtactatgactgctgattgccttggg
acacctggatacctgtcatctcacactggtatactaccaaaacccgagttctataatggt
cagaacgctattgtggcagtcaatgttcacctgggttacaaccaagaagattcattagta
atgaaccgggcctctctggagcgtggcatgtttcggtctgagcatactcggagctacaag
gctgaagttgataataaagaatcttccgaaaagaggaggaaatccgatgatgcaataaat
tttggtaagactcaaagtaaaattggaagagttgacagcttggacgatgatggcttccct
tacatcggtgcaaacttgcaaagtggagacattgtcattggtaggtgtgcagaatctggg
gccgatcacagtatcaaactgaagcacactgagaagggtatggttcagaaagttgtgctc
tcttctaatgacgatggcaagaattttgctgttgtaagcctgagacaggttcgttcacca
tgtcttggagacaagttttccagtatgcatggacaaaagggagttctgggctttttggag
tctcaagagaatttccccttcaccattcaggggatagttccagatattgttataaacccg
catgcttttccttcacgacagactcctggtcaactcttggaagctgctctagggaaaggg
attgcttctggcggttcgcttaaatatgcgactcctttttccactccttctgttgatgcc
attacagaccagcttcacagggcagggttttcaagatgggggagtgagagggtgtacaat
ggccgaactggtgaaatgatgcgctcactcatattcatgggtccaacattctaccagcgc
ttaattcacatggctgaagacaaggttaaatttcgaaacactggacctgtccaccctctc
acacgacaaccggtagcggacaggaagcgttttggtggaatcaaatttggggagatggag
cgtgactgtcttatagctcatggcgcctcggccaacttacacgaacgcttgtttaccctc
agtgactcctcccagatgcacgtttgccagaaatgtaaaaatgttgcaaatgtgatccaa
cgatcggtggctggtggtcgtaagataaggggtccatactgtcgtgtttgcgagtcggtg
gatgacattgtgagagttaatgtaccgtatggagccaagttgttgtgccaggagctcttc
agcatgggcatcaatctcaagtttgaaacccaagtgtgttga

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