KEGG   Clavibacter nebraskensis: CMN_00925
Entry
CMN_00925         CDS       T02530                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cmc  Clavibacter nebraskensis
Pathway
cmc00740  Riboflavin metabolism
cmc01100  Metabolic pathways
cmc01110  Biosynthesis of secondary metabolites
cmc01240  Biosynthesis of cofactors
cmc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CMN_00925 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMN_00925 (ribD)
Enzymes [BR:cmc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CMN_00925 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CMN_00925 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Ldh_2
Other DBs
NCBI-ProteinID: CCE74881
UniProt: M5B975
LinkDB
Position
complement(946706..947773)
AA seq 355 aa
MHDDPTAAAAQALAPGDPALERAMRRGLELAAEGPAWGPNPRVGCVILDASGRVIAEGRH
RGAGSAHAEVDALRQLPAGGARGATAVVTLEPCNHTGRTGPCAAALIEAGVARVAYAVAD
PGVESSGGAARLRSAGVEVVPGVLGDEAERFLRVWLGSARLGRPFVTAKWASSLDGRIAA
ADGTSRWITGPAARHDVHRRRAEADAILVGTGTVLADDPALTARRPDGIPYPHQPAPVVL
GDRAIPDDAAVHRHPRRLIRIAGHDPAEAVAELGRRGIRHVFVEGGPTIVSALVAAGLVD
EVVAYLAPVLLGGPRTATGDLGVESMPAAHRLTLISTTRLGDDLLVIARPTTEGQ
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcacgacgacccgacggcagccgcggcgcaggcgctcgcgcccggcgaccccgcgctc
gagcgcgccatgcgccgcggcctcgagctcgccgccgagggccccgcgtggggcccgaac
ccccgcgtcggctgcgtgatcctcgacgcctccggccgcgtcatcgccgagggccggcac
cgcggcgccggatccgcccacgccgaggtcgacgcgctgcggcagctgcccgcgggcggc
gcacgcggggccaccgcggtcgtcacgctcgagccctgcaaccacacgggccgcaccggg
ccgtgcgccgccgcgctcatcgaggccggcgtcgcgcgcgtcgcctacgccgtggccgac
ccaggcgtcgagtcctcgggtggcgcggcccgcctgcgctccgcgggcgtcgaggtcgtg
ccgggtgtgctcggcgacgaggcggagaggttcctccgggtgtggctcggatccgcccgc
ctcggccgcccgttcgtcacggcgaagtgggcctccagcctcgacggccgcatcgccgcc
gccgacggcacgagccgctggatcaccgggcccgccgcgcgccacgacgtgcaccgccgt
cgcgcggaggccgacgcgatcctcgtgggcaccggcaccgtgctcgccgacgaccccgcc
ctcaccgcccggcggcccgacgggatcccgtacccgcaccagcccgcgcccgtcgtgctc
ggcgaccgcgcgatcccggacgacgcggccgtgcaccggcacccgcgccggctgatccgc
atcgccgggcacgatcctgcggaagcggtcgcggagctcggccgccgcggcatccggcac
gtgttcgtggagggcggtcccacgatcgtctccgcgctcgtcgccgccgggctcgtggac
gaggtggtcgcctacctcgcgcccgtgcttctcggcggcccccgcaccgcgaccggcgac
ctcggcgtcgagagcatgccggccgcccaccgactcaccctcatcagcacgacacggctc
ggggacgacctcctcgtgatcgcgcgacccaccacggaaggccagtga

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