Clavibacter nebraskensis: CMN_01796
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Entry
CMN_01796 CDS
T02530
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00750
Vitamin B6 metabolism
cmc01100
Metabolic pathways
cmc01240
Biosynthesis of cofactors
Module
cmc_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
CMN_01796 (pdxS)
Enzymes [BR:
cmc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
CMN_01796 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
TetR_C_27
IGPS
OMPdecase
DHO_dh
Glu_synthase
NanE
NMO
Motif
Other DBs
NCBI-ProteinID:
CCE75741
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Position
complement(1886490..1887392)
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AA seq
300 aa
AA seq
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MTDTNTPGQVGSSRVKRGLAEMLKGGVIMDVVTAEQARIAEDAGAVAVMALERVPADIRS
QGGVARMSDPDLIDQIKAEVSIPVMAKARIGHFVEAQVLQSLEVDYIDESEVLSPADYVN
HIDKWGFTVPFVCGATTLGEALRRITEGAAMIRSKGEAGTGDVSEATKHIRTIKSEIRAL
RALTHDEIYVAAKELQAPYDLVLEVATTGQLPVVLFTAGGVATPADAAMMMQLGADGVFV
GSGIFKSGNPVARAKAVVTATALFNDPDAIAEASRGLGEAMVGINVADVPAPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaacacccccggacaggtcggctcgagccgcgtcaagcgcggactcgcg
gagatgctcaagggcggcgtcatcatggacgtcgtcaccgccgagcaggcgcgcatcgcg
gaggacgcgggagcggtcgccgtcatggcgctcgagcgcgtccccgccgacatccgctcg
cagggcggcgtcgcccgcatgagcgaccccgacctcatcgaccagatcaaggccgaggtc
tccatccccgtcatggcgaaggcccgcatcggccacttcgtcgaggcgcaggtcctccag
tccctcgaggtcgactacatcgacgaatccgaggtgctgagcccggccgactacgtgaac
cacatcgacaagtggggcttcaccgtccccttcgtctgcggtgccaccacgctcggcgag
gcgctccgccgcatcaccgagggcgcggccatgatccgctccaagggcgaggccggcacg
ggcgacgtctccgaggccaccaagcacatccgcaccatcaagtccgagatccgcgcgctc
agggccctcacgcacgacgagatctacgtcgccgcgaaggagctgcaggcgccgtacgac
ctcgtgctcgaggtcgccacgacgggtcagctccccgtcgtcctcttcaccgcgggcggc
gtggccacccctgcggacgccgcgatgatgatgcagctcggcgccgacggcgtgttcgtc
ggatccggcatcttcaagtccggcaacccggtcgcgcgcgcgaaggcggtcgtcacggcc
accgcgctgttcaacgaccccgacgccatcgccgaggcgtcgcgcgggctgggcgaggcc
atggtcgggatcaacgtcgccgacgtccccgccccgcaccgcctcgccgagcgtggctgg
tag
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