Clavibacter nebraskensis: CMN_02503
Help
Entry
CMN_02503 CDS
T02530
Symbol
sucD
Name
(GenBank) Cmm ortholog CMM_2547; Cms ortholog CMS_2595
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00020
Citrate cycle (TCA cycle)
cmc00640
Propanoate metabolism
cmc00660
C5-Branched dibasic acid metabolism
cmc01100
Metabolic pathways
cmc01110
Biosynthesis of secondary metabolites
cmc01120
Microbial metabolism in diverse environments
cmc01200
Carbon metabolism
Module
cmc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cmc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMN_02503 (sucD)
00640 Propanoate metabolism
CMN_02503 (sucD)
00660 C5-Branched dibasic acid metabolism
CMN_02503 (sucD)
Enzymes [BR:
cmc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CMN_02503 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
CCE76437
UniProt:
M5BDV2
LinkDB
All DBs
Position
complement(2652463..2653350)
Genome browser
AA seq
295 aa
AA seq
DB search
MSILLDENSRIIVQGLTGSEGTKHAGRMLASGSKVVGGVNPRKAGSTVTIEGVELPIFGS
VAEAMAETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKSTG
GKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRDLGISTAI
GIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHVTKPVVAYVAG
FTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFAAL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcttctcgacgagaacagcaggatcatcgtccagggcctcacgggctccgag
ggcaccaagcacgcgggccgcatgctcgcgtccggcagcaaggtcgtcggcggcgtcaac
ccgcgcaaggcgggcagcacggtcaccatcgagggcgtcgagctcccgatcttcggctcg
gtcgccgaggccatggcggagacgggtgccgacgtgtcggtcatcttcgtccccccggcc
ttcgcgaagagcgccgtggtggaggcgatcgacgccgccatcccgctcgcggtcgtcatc
accgagggcatcccggtcaaggactccgcggagttctggtcgcacgccaagagcacaggc
gggaagacccgcatcgtcggcccgaactgccccggaatcatcagccccggcaagtcgaac
gccggcatcatccccgccaccatcacggaagccggccccatcggcctcgtgtcgaagtcg
ggcacgctcacgtaccagatgatgttcgagctgcgcgacctcggcatctcgaccgccatc
ggcatcggtggcgacccgatcatcggcaccacgcacatcgacgccctcgaggcgttcgag
gccgacccggagacgcgcgccatcgtcatgatcggcgagatcggcggcgacgccgaggag
cgcgcggccgagtacatcaaggcgcacgtcaccaagccggtcgtcgcgtacgtcgcgggc
ttcacggctcccgagggcaagaccatgggccacgccggcgccatcgtctccggcggcagc
ggtacggcgcagggcaagaaggaggccctcgaggcctccggcgtcaaggtcggcaagacg
ccgaccgagacggccaacctcctccgcgaggtcttcgcggccctgtag
DBGET
integrated database retrieval system
