KEGG   Cyanidioschyzon merolae: CYME_CMH017C
Entry
CYME_CMH017C      CDS       T00175                                 
Name
(RefSeq) RNA polymerase I, II, III common subunit
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03020  RNA polymerase
cme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CYME_CMH017C
  09124 Replication and repair
   03420 Nucleotide excision repair
    CYME_CMH017C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cme03021]
    CYME_CMH017C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMH017C
Transcription machinery [BR:cme03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CYME_CMH017C
  RNA polymerase III system
   RNA polymerase III
     CYME_CMH017C
  RNA polymerase I system
   RNA polymerase I
     CYME_CMH017C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CYME_CMH017C
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 16993354
NCBI-ProteinID: XP_005536008
UniProt: M1VBK5
LinkDB
Position
8:complement(48464..48964)
AA seq 166 aa
MAADEEDVDDYIEDEEAEPELPYDYGDDYEGEELQEESEELKESVPETEIDAEVLPDGEQ
EQKPTIYAGDNEKVARESSHWSKDQSDLKNRVTTPFLTKYERARVLGARALQISLGAPVL
VDLEGESDPLLIAEKELRAKKIPLKIRRHLPNGAYEDWSVNELTSD
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcagccgatgaggaagacgtagatgactatatcgaagacgaggaagctgaacccgag
ttgccctatgactatggcgatgactatgagggtgaggaacttcaggaagagtcagaggag
ctgaaagagtccgttcctgaaacagagatcgatgccgaagtactccctgacggggagcag
gagcaaaagccaacgatatacgctggggacaatgagaaggttgctcgagaatcaagccac
tggagcaaagaccagtcggacctaaagaatagagtgacgactcctttcctgaccaagtac
gaacgcgcacgcgtgcttggcgcgcgtgctctgcagatcagtttgggagcccccgtgctg
gttgacctcgagggtgaaagcgatccactgctgatagcggagaaagaacttcgtgcaaag
aagataccgttgaagattcgacgacacttgccgaacggcgcgtacgaggactggagcgtc
aacgagcttacgagcgattga

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