Cyanidioschyzon merolae: CYME_CMK058C
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Entry
CYME_CMK058C CDS
T00175
Name
(RefSeq) geranylgeranyl diphosphate synthase, chloroplast precursor
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00900
Terpenoid backbone biosynthesis
cme01100
Metabolic pathways
cme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CYME_CMK058C
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cme01006
]
CYME_CMK058C
Enzymes [BR:
cme01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CYME_CMK058C
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CYME_CMK058C
2.5.1.29 geranylgeranyl diphosphate synthase
CYME_CMK058C
Prenyltransferases [BR:
cme01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CYME_CMK058C
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
16994416
NCBI-ProteinID:
XP_005536487
UniProt:
M1US29
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All DBs
Position
11:167218..168384
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AA seq
388 aa
AA seq
DB search
MTPPFFCHTFCSAGAFVPVNVSHFRAQLRKQETCEELASRDAWGRSRSRGNCLHGKNLPS
RHRQALLLLGTATAGSSAEVRHGSPKSRTTEAVEFLLAKRASIDAALNDAVQATSVMNAR
LAEAMRYSLLAGGKRVRPALVLAACRMFGGVDEQAMPTAVAVEMVHTMSLIHDDLPAMDN
DDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQIAEKTPATLVPPSRTLEVIRRLGNCVG
LHGLAAGQALDLEAEGKPADEISLRMLETIHLYKTAALLRFSITAGAILAGASVDDIDCM
ESFANKIGLAFQVADDVLDVTATTETLGKTAGKDVAAEKATFPRILGLEESRKYAEDLVK
EAKGELAKYGDRASLLLGFADFIIQRAS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgactccgccgttcttctgccacaccttctgttcagcgggggcgtttgtcccggtgaac
gtaagccactttcgtgctcagttgagaaagcaggagacttgtgaggaacttgcttcgagg
gacgcttggggtcgctccagaagcagggggaactgtttgcatggtaagaacttgccgagc
aggcaccggcaagcgttgcttttacttggaacggcgactgcaggctccagtgcagaggtt
cgacacggctcgccaaagtcgcgaaccaccgaggcagttgagttccttctcgctaagagg
gcctccatagacgccgctcttaatgacgccgtgcaagcaacctccgttatgaatgcccgc
ctagcggaggcgatgcgttactctttgctcgccggagggaaacgtgtacggccggcactc
gtcttagctgcgtgcagaatgtttggaggtgtcgatgaacaggcgatgcccacggccgtc
gcagtggagatggttcatacaatgagcctcattcatgacgatctcccggcgatggataat
gatgatttccggcgcggacgtccaacaaaccacaaggtttacggtgaggaagtagccatc
cttgctggggacgcgttacttagcgaggcgttctcgcagatcgcagagaaaactccagca
acccttgtaccaccgagtcgcacgcttgaggtcattagacgcctcggaaactgtgtcggc
ttacatggcttggcagccggacaagcgcttgatcttgaggcggagggaaaaccagcagat
gagatcagcctacgcatgctggaaacgatccatctgtacaaaaccgccgcattgttgcgc
ttttccatcaccgcgggagcgattctagcaggtgcctcagtagatgacattgattgtatg
gaaagctttgcgaacaaaattggtcttgcttttcaagttgcggatgatgtcctggatgtg
accgcgacgaccgagacacttggcaagactgccggaaaagatgttgcggccgagaaggcg
acgtttccgcgcatacttggtcttgaagaaagccgaaagtatgctgaagacttggtcaag
gaggcgaagggagaactcgccaagtacggcgaccgggcatcattgctcttgggttttgcg
gatttcatcattcagcgcgcgagctag
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