Cronobacter malonaticus LMG 23826: AFK66_000440
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Entry
AFK66_000440 CDS
T04062
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj00540
Lipopolysaccharide biosynthesis
cmj01100
Metabolic pathways
cmj01250
Biosynthesis of nucleotide sugars
Module
cmj_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AFK66_000440 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cmj01005
]
AFK66_000440 (rfaD)
Enzymes [BR:
cmj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AFK66_000440 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cmj01005
]
Core region
AFK66_000440 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ALX80400
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Position
4012602..4013534
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDIGYTDILVVDNLKDGTKFVNLVDLNIADYMDKEDFQVQI
MSGEEFGEVEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQITGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAALAFHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgcgggttttatcggcagcaacattgttaaggctctgaac
gacatcggctataccgatatcctggtagtggacaacctgaaagacggcaccaagttcgtc
aacctggtggatctgaatatcgccgattacatggataaagaagatttccaggtgcagatc
atgtccggtgaggagtttggcgaggttgaagccgtgttccacgaaggcgcctgctcatcc
actaccgagtgggacggcaagtatatgatggacaacaactatcagtactccaaagagctg
ctgcactactgcctggagcgcgaaatcccgttcctgtacgcctcctccgccgctacctac
ggcgggcgcacttctgacttcatcgaatcacgcgaatatgagaagccgctgaacgtatac
ggctactcgaaattcctgttcgatgaatacgttcgccagatcctgccggaagcgaactcg
caaatcaccggcttccgttacttcaacgtctacggcccgcgcgaaggccacaaaggcagc
atggcgagcgtggcgtttcacctcaatacccagctgaataacggcgaaagcccgaaactg
tttgaaggcagcgaaaacttcaagcgcgacttcatctacgtgggcgatgtggccgcggtg
aacctgtggttctggcagaacggcgtatccggcattttcaactgcggcaccggtcgtgcg
gagtcgttccaggctgtggcggatgctgcgctggccttccataaaaaaggcagcattgag
tacatcccgttcccggaaaaactcaaaggccgctatcaggcgtttacccaggccgatctc
actaacctgcgcgccgcaggctatgacaagccgtttaaaaccgttgccgaaggggtcgcg
gagtatatggcctggctgaaccgcgacgcataa
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