Cronobacter malonaticus LMG 23826: AFK66_004740
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Entry
AFK66_004740 CDS
T04062
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj00190
Oxidative phosphorylation
cmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AFK66_004740
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK66_004740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmj03019
]
AFK66_004740
Enzymes [BR:
cmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AFK66_004740
Messenger RNA biogenesis [BR:
cmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AFK66_004740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ALX77665
LinkDB
All DBs
Position
complement(981479..983539)
Genome browser
AA seq
686 aa
AA seq
DB search
MGQEKLYIEKELSWLSFNERVLQEAADKTNPLIERMRFLGIYSNNLDEFYKVRFAELKRR
IIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNDLLLEMARNQIFLINERQLSENQQ
VWLRHYFKHYLRQHVTPTLINRDTDLVQFLKDDYTYLAVEIIRGESIRYALLEIPADKVP
RFVNLPPETPRRRKPMILLDNILRFCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME
SSLLELMSSSLKQRLTAEPVRFVYQRDMPDAMVQMLREKLSISRYDSIVPGGRYHNFKDF
ISFPNVGKANLINKPLPRLRHIWFDQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASF
DPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSAPGLKIHAKLFLISRKEGDDVVRYAHIGTGNFNEKTARLYTDYSLLTADARITN
EVRRVFNFIENPYRPVSFDYLLVSPQNSRRLLYEMIDQEIANAQQGLPSGITLKLNNLVD
KGLVDRLYAASGSGVKVNLLIRGMCSLIPQLEGLSDNIQVISIVDRYLEHDRVYIFENGG
DKRVYLSSADWMTRNIDYRIEVAAPLLDPRLKQRILDIIDILFSDTVKARYVDKELSNRY
VPRGNRRKVRAQLAIYDYIKSLEQPE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaaagctttatatcgaaaaagaactgagctggttatcgttcaacgaacgc
gtattgcaggaggcggcggataaaaccaacccgcttatcgagcgcatgcgctttctgggc
atctactccaataaccttgatgaattttataaggtccggtttgccgagcttaagcggcgc
attatcatcagcgaagagcagggttctaactcccattcgcgccacctgctgggcaagatc
cagtcgcgggtgttgaaagcggatcaggagtttgacggcctgtataacgatctgctgctg
gagatggcgcgtaaccaaatcttcctgattaacgaacgccagctttctgaaaaccagcag
gtgtggctgcgccactacttcaaacactatctgcgccagcacgtcaccccgacgctgatt
aatcgcgacaccgatctggtgcagttcctgaaagacgattacacctatctggcggtcgaa
attatccgcggcgaatcgattcgctacgcgctgctggagatcccggccgataaagtgccg
cgcttcgtgaatctcccgcccgaaaccccgcgccgccgcaaaccgatgatcttgctggat
aacattctgcgcttctgcctggatgacattttcaaaggctttttcgattacgacgcgctg
aacgcctattccatgaagatgacgcgcgatgcggaatacgatctggtgcatgagatggaa
tcgagcctgctggagctgatgtcttcaagcctcaagcagcgcctcaccgccgaaccggtg
cgtttcgtctaccagcgcgacatgccggacgcgatggtgcagatgctgcgcgagaagctc
tctatctcgcgctatgactccatcgtgccgggcggtcgctaccataactttaaagatttc
attagcttcccgaatgtcgggaaagcgaatctgatcaacaaaccgctgccgcgcctgcgc
cacatctggttcgatcaattccgcaacggctttgacgctattcgcgagcgcgacgtgctg
ctctactacccgtatcacacgttcgagcatgtgctggaactgctgcgccaggcgtcgttc
gacccgagcgtgctggccatcaaaatcaatatctatcgcgtggcgaaagactcgcgcatt
atcgactcgatgatccacgccgcgcacaacggcaagaaagtaaccgtggtggtggagtta
caggcgcgcttcgatgaagaggcgaatattcactgggcgaaacgcctcaccgaagcgggc
gtgcatgtgatcttctcagcgcctggccttaagattcacgccaagctgtttctcatctcg
cgtaaagagggtgacgacgtggtgcgctacgcgcatatcggcaccggcaactttaacgag
aaaaccgcgcgcctctataccgactactcgctgctgaccgccgacgcgcgtatcaccaat
gaagtgcgccgtgtgtttaactttatcgagaacccttaccggccggtgagcttcgattac
ctgctggtgtcgccgcaaaactcgcgccgcctgctttacgagatgatcgaccaggagatc
gccaacgcgcagcaggggctgccgtcagggatcacgcttaagctcaataacctcgtcgat
aaaggtctggtggatcgcctctacgcggcgtccggctccggcgtaaaagtcaacctgttg
atccgcggcatgtgttcgcttatcccgcagcttgagggcctgagcgataatattcaggtc
atcagtatcgttgaccgctatcttgaacatgaccgggtctatattttcgaaaacggcggc
gataaacgcgtttatttgtcgtctgccgactggatgacgcgtaatatcgactaccgcatt
gaggtggccgcgccgctgctggacccgcgcctgaaacagcgcattctggatattattgat
atcctgttcagtgatacggtaaaagcccgttatgtggataaagaactgagtaatcgctat
gtgccgcgtggtaatcgccgcaaagttcgcgcacaattggcgatttacgattacataaaa
tctctggaacagcctgaataa
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