Callorhinchus milii (elephant shark): 103175724
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Entry
103175724 CDS
T03088
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04020
Calcium signaling pathway
cmk04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103175724 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103175724 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103175724 (grin2cb)
Ion channels [BR:
cmk04040
]
Ligand-gated channels
Glutamate (ionotropic)
103175724 (grin2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Corona_6B_7B
Motif
Other DBs
NCBI-GeneID:
103175724
NCBI-ProteinID:
XP_007887088
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
VSAVECAFSRDPSRPAISVAVVLGGSWYSLEIKGQFSRDVFQGLPLQINPIIEVVNNTNP
SSLLTQICGVLSSSSIHGVIFEDNIESDAVAQILDFISAQTLIPIIGISGGSAAVLAPKE
QHSAFLQLGASIEQQISVIFKVLEEYDWNSFAIITSLFPGYQEFIDYIKLFTGTSYFGWE
IEQTLTFEMTRDENNSKTQRLLKQIDAQVLLLYCSREEAEYLFEEAEEAGLVGPGYIWIV
PSVTVGNTEQVAKSFPVGLIGIMTDRWNTNLRQRVRDGVAIVAKGVDSFFSEHGYIPDLS
SDCRSLGGLYNNAFYRYMLNVSWEGKDFSFNEDGYLVRPIMVVMTLNRGRYWEMVGKWEN
SLIRMKYPVWPRYGTSLQPVSDSHHLTVATLEERPFVIVEAVEPMTGGCVRNTVPCRKQA
NHSESATSIVDPYTKLCCKGFCIDILKKLSKTVKFSYDLYLVTNGKHGKKVRGIWNGMIG
EVFYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVW
VMMFVMCLTVVAITVFIFEYFSPVGYNRNLNDGKNPGGPTFTIGKSVWLLWALVFNNSVP
IENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQFIDTVSGLSDNKFQKPQEHYP
PFRFGTVPNGSTERNIKNNYPDMHSHMTKYNQRSVEDALNSLKSGKLDAFIYDAAVLNYM
AGKDEGCKLVTIGSGKVFATTGYGIAMQKESKWKRPIDLGLLQFLGDGETQKLQTVWLTG
ICENEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLFYWKLRYHMRKSKKMDFL
LAISRGIYSCFNGVQEAESPMHIVPPAMPTAYAHANMLKMLQTAKDMVSSANVEHSLENA
TKAIENWTHAGDSVRGSFPDRTSQPMEDACGIASKHHFVPCISNSNHIHCIPRTINTAPT
LLQNRGPGRQFMEPQRITADHPIITYKSHSPGKCQDPKCPAGSTVIHNPHPCTPTNITYS
RAQHDRKIYGENDFKSPSTPFASSEESCYHDIYNRKYFPRRLHSPCLARSRKLSHYSLGD
CTNLRGADTMNAVKSCVGLNEKRYLGNHSSSMSHINRLQNMDANCNSCLRFHTESEPEEI
PLLGRDRLGRRSSYVKATREQRGKPRLQDVCGSIEKLKVQGEIPDLFPRTRTAPRTNPEI
LDPIANNISQPSDTAQDNYVQDHIHLDADCRHAGPQHRLKHSQSAKLPSYSEACLQSSAA
LRRSSTVVHRHYSWLNPYTNPPVYIWQRNVESQQLNKHSSEMFSCLARPGHLACEQGLMM
KYLEKRTTYEDSDFREPQPGRNRMVCHQIRTRGKRQLVSSRTIDNSSYLRKPCARVSSLE
SEV
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
gtttctgcggtggagtgcgccttctccagggaccccagccgtcccgccattagcgtcgcc
gttgtgctcggaggctcttggtacagtttggagatcaagggacaattcagccgagacgtc
tttcaaggccttcctctgcaaatcaacccgatcatcgaggtggtcaacaacaccaacccc
agcagcctgctgactcagatctgcggggtgctgtccagctcaagcatccacggtgtgatc
tttgaggataatattgagtcagacgccgtggcacaaatcctggactttatctccgcacaa
actttgattccgatcataggaatcagtggaggctctgccgctgtcctcgctccaaaggag
caacactctgcattcctgcagctgggggcttcaatagaacaacagatcagcgtcattttc
aaagtcttggaagaatatgactggaattcctttgccatcatcaccagcctcttccccggg
taccaggagtttatcgactacatcaagttgttcaccggcaccagctactttgggtgggaa
atcgaacagacccttaccttcgagatgacgcgagacgagaacaattccaaaacccagagg
ctcctgaagcagatcgacgctcaagtcctgcttctttactgctcgcgggaggaagcggag
tacctcttcgaagaggctgaggaggctgggctggtggggcctggctatatctggattgtg
cccagcgtcacggtgggcaacacggaacaggtggcgaagagcttccccgtggggttaatc
gggatcatgaccgaccgatggaacacaaatttgcgacagagggtgcgggacggtgtggcc
atagtcgcgaaaggcgtggacagcttcttcagtgaacatggatacatccctgacctgagc
tccgactgcaggagcctgggaggcctctacaacaacgccttttacaggtacatgctgaac
gtgagctgggaaggaaaagatttctccttcaatgaggacggctatttggtgagacctatc
atggtggtgatgacactgaacagaggaaggtattgggaaatggttggcaaatgggagaac
agtctgataagaatgaaatatcccgtgtggccaaggtacgggacctctctacagcccgtg
tctgacagccaccacttgactgtggccacgctggaggaaaggccctttgtgatcgtggag
gcggtggagcccatgaccggtggctgtgtgaggaacacggtgccctgtaggaagcaagcc
aaccacagtgaaagcgcaacgagtatcgttgacccatacaccaagctgtgctgtaaaggg
ttttgcatcgacatcctgaaaaaactgtccaaaactgtgaagttctcctacgacctttac
ctcgtgacaaatggaaaacacggaaagaaggttcgaggaatctggaatggaatgatcggt
gaggtcttctataagcgagctgacatggccattggatctctcacaataaacgaagaacgc
tccgagattgtggatttctccgtaccgtttgtagaaaccgggatcagcgtgatggtcgcc
aggagcaatgggactgtctcaccatcagcttttctagagccgtacagccctgcagtgtgg
gtgatgatgttcgtcatgtgtttgactgttgtggctatcacagtcttcatcttcgagtac
ttcagtcctgttggctataacagaaacctgaacgatggtaaaaatccaggaggtccaacg
ttcacgataggaaaatctgtgtggcttctctgggctttggtgttcaacaactctgtccca
attgaaaatcccaaaggaacgacaagtaaaatcatggtgctgatctgggccttcttcgct
gtgatctttcttgccagctatacagcaaacctggcagctttcatgatccaggagcagttc
attgatactgtctcgggtctcagtgacaacaagtttcagaagccgcaggagcattaccca
ccgttccgtttcggcacggtgcccaacggaagcactgagaggaacatcaaaaacaactac
ccggacatgcactcgcacatgaccaagtacaaccagcgctccgtggaagatgcactaaac
agccttaaatcagggaagctggatgcctttatttatgatgcagctgtgctgaactacatg
gccgggaaggatgaagggtgtaaactggtgacaattggtagtgggaaggtgtttgcaacc
accggttatggaatagcaatgcagaaggagtctaaatggaagagacccatagatctgggt
ctgctgcagttccttggtgatggagagactcagaagcttcagacggtctggctgactgga
atctgtgagaatgagaagaacgaagtgatgagcagcaaattggacatcgataacatggcc
ggagtgttctacatgcttctggtcgcgatgggacttagccttctagtttttgcctgggag
catcttttctactggaagctgagataccacatgaggaaatcaaagaaaatggattttctt
cttgcaattagcagggggatctacagctgtttcaatggcgtgcaggaagccgagagtcct
atgcatatcgtgcctcccgcgatgcccacagcctacgctcacgccaacatgttgaagatg
ctgcagacggcgaaggacatggtttcttcagccaatgtggaacattctttggaaaacgcc
acaaaggccattgaaaactggacgcacgcgggagacagcgtacgaggcagttttcccgat
cgaacttcgcagcccatggaagacgcctgcggcattgcgagcaagcatcactttgtgcca
tgcatctccaacagcaatcacatccattgcattccccgcacaataaacacagcgccgact
cttcttcagaacaggggacctggacggcagtttatggagccacagaggataacggcagat
cacccaataattacatacaagagccactccccaggtaaatgccaggaccccaaatgtcct
gcagggtctactgtgatccacaatccccacccatgcaccccgactaacatcacctactcg
cgtgcacagcacgacagaaagatttatggggaaaacgatttcaagagccccagtactccg
tttgctagctcagaagaatcgtgctaccacgacatttataacaggaagtacttcccaaga
aggctccactcgccttgtttagccaggagcaggaaactatcccattattctctcggcgat
tgcaccaacttgcgtggagcggacaccatgaacgcagtcaagtcctgcgttggattgaac
gagaagcgatatttgggaaatcactcctcgtcgatgtctcacatcaaccgactgcagaac
atggacgcaaactgcaactcctgcctcaggttccacaccgagtcagagcccgaagagatc
ccactgctaggcagggacaggctcggccgacgctcctcttacgtcaaagccacaagggag
cagagaggaaaaccgaggctacaagatgtttgtggaagcatcgaaaagctgaaggtccag
ggggagatcccagacttattccctagaacaagaactgctcccagaaccaaccctgagatc
ttagaccccatcgcaaacaacatcagccaaccctcagacacagcacaagacaactatgta
caggaccacattcatttggatgcagattgcagacacgcaggcccacaacatagactcaag
cactctcagtctgcaaagctgccctcgtacagcgaggcctgtctccaaagctcagccgca
ctgcgtcgctcctccactgtagtgcacagacactactcctggctcaacccatacaccaac
ccacccgtctacatttggcagcgcaatgtggagtctcagcagctgaacaaacattccagt
gaaatgttcagctgtctggcgaggcccggccatctcgcttgcgagcaaggcctcatgatg
aagtacttggaaaaaaggactacatatgaggacagtgatttcagggagcctcaaccaggc
aggaataggatggtctgccatcagataaggacccgaggaaaacgccagcttgtatcttca
agaacaatagataattcttcttatctgaggaaaccttgtgcaagggtttccagcctggaa
tctgaggtatag
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