Callorhinchus milii (elephant shark): 103177625
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Entry
103177625 CDS
T03088
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04210
Apoptosis
cmk04218
Cellular senescence
cmk04620
Toll-like receptor signaling pathway
cmk04621
NOD-like receptor signaling pathway
cmk04622
RIG-I-like receptor signaling pathway
cmk04623
Cytosolic DNA-sensing pathway
cmk04625
C-type lectin receptor signaling pathway
cmk04920
Adipocytokine signaling pathway
cmk05132
Salmonella infection
cmk05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103177625
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103177625
04218 Cellular senescence
103177625
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103177625
04621 NOD-like receptor signaling pathway
103177625
04622 RIG-I-like receptor signaling pathway
103177625
04623 Cytosolic DNA-sensing pathway
103177625
04625 C-type lectin receptor signaling pathway
103177625
09152 Endocrine system
04920 Adipocytokine signaling pathway
103177625
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103177625
09171 Infectious disease: bacterial
05132 Salmonella infection
103177625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103177625
Transcription factors [BR:
cmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
103177625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
103177625
NCBI-ProteinID:
XP_007890062
UniProt:
A0A4W3J1Y3
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MAEDDTYQLRMFNMDNYSAGMFNSPIGPTDPPLQTPDGPYLQIVEQPKQRGFRFRYGCEG
PSHGGLPGASSEKNKKTYPTVKICNYVGNAKIVVQLVTCGKTAVHLHAHSLVGKQCEKGI
CLVQLGPKEMTSVFPNLGILHVTKKNVASTLEQRMVHACIMGYNNGIVIHPEINHRHIET
CSMRELTERERELIHQASIQQAKEMDLSVVRLMFTALLPDSSCRFTRRLEPVISDPIYDS
KAPNASNLRIVRMDKTAGCVTGGDEVYLLCDKVQKDDIQVRFYEENENGGIWEALGDFGP
TDVHRQFAIVFRTPKYRDLTISKPASVFVQLRRRSDNETSEPKPFTYYPQINDKEEVQRK
RQKLLPNFSDHFGGGGGGGMYGGGGGAAGGGGGSSYYPGFQGYTNFSPYPYPPGATNASA
GMKHAAGSSIEDNGDDVGTAGNDFSSNPSESQEQPKTSERPSHSDIEAETTEQGLQAADW
YFTELALNLAERHAKALLDYSITGDVKILLAVQRYLTTVQDENGDAALHLAIIHLQPLVA
QQLLQVIVSIPNNEIVDMRNHLYQTPLHLAVITRQTEVVELLLKAGADMSLLDCHGNSVL
HKAAEQGDVKTLNILLNKKGKALTDLLALPNNAGCYAIHLAVLANSLPCLRQLIAAGAAV
DAQEQRSGRTALHLAVEQENISLAGSLLLEGNAEVDAITFDGCTPLHVAAGRGSAKLSAL
LMAAGADPHIENYEPLDDKTEEFLEEGDDEGIFHGTKPLDIAATQEVYETLNGKPYQPKS
GPAPTFPQGDLGQLDVEAKLELCKLLEVPDPSLNWMTLAQKLGLGILINAFKLSPSPSKT
LLDNYEVSGGTTTELVETLKSMGYIKALDVILKALTKSEDTRSEETVVPEENNVQIQPKP
QQCDSVCDSGVETSFKRLSLSSESFSNN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatgatacataccagcttcgaatgtttaacatggacaactattctgccggc
atgttcaatagtccaattggcccaacagaccctccactgcagacgcctgatggaccttat
cttcagatcgtagaacagcccaaacagcgtggttttcgtttccgttatggatgtgaggga
ccatcacacggaggattacctggtgcttccagtgagaaaaacaagaaaacctacccaact
gttaagatatgtaactacgttggaaatgcgaaaattgttgttcagttggtgacgtgtggc
aaaactgccgtacatcttcacgctcacagtctagtcggaaaacaatgcgaaaaaggaata
tgtctagtccaattgggaccgaaggaaatgacttcagtgtttccaaaccttgggatcctc
catgttactaagaagaatgttgccagcacacttgaacaacgaatggttcatgcttgtatt
atgggatataataatggaatcgtaatacatcctgaaataaatcaccggcacattgaaact
tgtagtatgagagaacttacagaacgtgaaagggaactgatccaccaagcgtccatacag
caggcgaaagagatggacctcagtgtggtgcgactcatgtttacagccctacttccagac
agcagttgtcgttttacacgaagattggaacctgtaatatccgacccgatctacgacagc
aaggccccaaatgcatcaaatctacggattgtaagaatggacaagactgcaggctgtgtg
acaggaggagatgaagtttatctactttgtgataaagtccagaaagatgatatccaggtc
cgtttctacgaggagaatgaaaatggaggaatttgggaagcacttggagattttgggccc
actgacgttcaccgtcagttcgctatagttttcagaactccaaaataccgggacttgact
atttccaagcccgcttctgtatttgtgcagcttcgcagacgatcggataatgagacgagt
gaaccaaagccatttacatactacccacagatcaacgacaaagaggaagtacaaaggaaa
cggcagaaactgttgcccaatttctcagatcattttggaggtggaggtggtggtggaatg
tatggaggaggaggcggagcagcaggaggaggaggtggttcaagttactatcctggattt
caaggatataccaactttagtccttacccatacccacctggggctacaaacgctagtgct
ggaatgaaacatgctgccggttcctcaattgaggacaatggtgatgatgtggggactgct
gggaatgacttttccagtaatccatccgaatcgcaggagcaaccaaagaccagcgagagg
cccagccattcagatatcgaagcagaaaccactgaacaaggactgcaggcagctgactgg
tactttactgagctggcactgaacctggcagaacgccacgccaaagccctgttggattat
tccatcaccggggacgtgaaaatcttgctggctgttcagcgatatctcacaacagttcaa
gatgaaaatggggatgcggctttacacctcgcaatcatccaccttcaaccgttggtggca
caacaactgctacaagtgattgtcagcattcccaacaacgagattgtggacatgaggaat
cacctctaccagactccgttgcacttggcagttatcacaaggcaaactgaagtggtggag
ctgctgctgaaggctggtgctgacatgagtctcctggattgccacggtaactcagtgcta
cataaggctgcagagcagggcgacgtaaagactctgaacatattgctgaacaagaagggc
aaagcactgactgacctccttgctttgccaaataatgcaggatgttatgccattcacctg
gcagtgctagccaacagcttgccatgcttgaggcaattgattgcagctggagctgctgtg
gatgctcaagagcagcggtcagggcgaactgcgctgcatctagcagtagagcaggaaaac
atctccttggctggtagccttctgcttgagggcaatgctgaggttgatgccatcacattt
gatggttgtactccacttcacgtagcagcaggaagaggctcagcaaagttatcagcccta
ctaatggcagcaggtgcagacccacatatagagaattacgagccgttggatgacaaaaca
gaagagtttctggaagaaggtgatgatgagggtatctttcacgggaccaaacctttagac
atagcagccactcaggaggtttatgaaacactgaatggtaaaccgtaccaacccaagagt
ggacctgctccaactttcccacaaggagatttgggtcaactggatgtggaagcaaagcta
gagctctgtaagctgttagaggtgcctgatccaagcttgaactggatgactctcgcacag
aaattgggcctggggattcttattaatgctttcaaactcagcccttccccatcaaagaca
ctgctggataactatgaggtgtctggtggtactactacagagcttgtggaaactttgaag
tccatgggctacattaaagcacttgacgtaatccttaaggcactgaccaaatcagaagac
acaagatcagaggaaactgttgtcccagaagaaaacaatgttcaaattcaacccaagccg
cagcagtgtgatagtgtatgtgacagtggagtggaaacatccttcaagaggctgagtctt
tcatcagaatcattcagcaacaactag
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integrated database retrieval system