Callorhinchus milii (elephant shark): 103179896
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Entry
103179896 CDS
T03088
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03020
RNA polymerase
cmk04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103179896 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103179896 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103179896 (polr3b)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103179896 (polr3b)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103179896 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
103179896
NCBI-ProteinID:
XP_042191530
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDCLAAEFGGLSGRELAAPVSTVKEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGVPDVEESFNVTRPVAPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTAAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEVDRKGTVGASVTSSTHEKKSRTNIAVKQGRFYLRHNTLSEDIPIAIIF
KAMGVESDQEIVQMIGTEDHVMSAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTVLTHVPVKEFNFCAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPNVFIVFL
NGNILGVIRHHQKLVKTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKN
GNSAVRNKHIEELTQGYRSFEDFLHEGLVEYLDVNEENDCYIALYEDMINIDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TKSIELIEFEKLPAGQNATIAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKR
YTNQTFDKVMGPMLDAATRKPIWRHEILDADGISSPGEKVENRQVLVNKSMPTVTQTPLE
GTAQSQQPQFRDVPITYKGATDSYIEKVMISSNSEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLSKYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggactgtttggccgcggagttcgggggcctcagcggccgagaactggcggccccggtc
agcaccgtgaaggaaaaatggaaactgcttcctgcttttctaaaggtcaaaggccttgta
aaacagcacattgactcattcaattatttcataaatgtagagataaagaaaattatgaaa
gcgaatgaaaaggtcaccagcgatgctgacccaatgtggtacttaaaatacctcaatata
tacgttggtgttcctgatgttgaagaaagttttaatgtaacaagaccagtagctccacat
gagtgtcgtctgagagatatgacctactctgcgccaatcactgtagacattgaatatacg
agaggaagccagagaataattcgaaatgcactacctattggccggatgcctataatgtta
cgtagttctaactgcgtacttacaggaaagactgctgcagagtttgcaaaactaaatgaa
tgtcctttggatccaggtggctatttcattgttaagggtgtagaaaaggttattctcatt
caagaacagttatcgaaaaacagaataatcgtagaggtagatagaaaaggaactgttggt
gcttctgtgacaagctctacccacgagaaaaaaagtagaaccaacatcgctgtgaaacaa
ggaaggttttacctgcgccacaatactctgtcagaagacattcccattgcaataatattt
aaggcgatgggagtcgagagtgaccaggagattgtacagatgattggcacagaggaccat
gtgatgtctgcgtttgggcctagtttagaggagtgtcagaaagctcagattttcacacag
atgcaggcattaaagtatattggaaacaaagtacgaaggcaacgaatgtggggaggaccg
aagaaaaccaagatggaagaagcacgggaactgctagcatcaactgttcttactcatgtg
cctgtcaaagaattcaacttttgtgcaaagtgcatctacacagctgttatggttcgcagg
gtaattctagctcaaggagacaacaaagtagatgaccgagattattatggaaataaacgt
ctggaacttgctggacagctgctttcacttctctttgaagacttgttcaaaaagttcaat
tcagagctgaagaagattgcagaccagatcatccccaagcagagagcagcgcagtttgat
gtagtcaagcacatgcgacaggaccaaatcaccaatggcatggtgaatgccatctcaact
ggaaactggtctcttaaaagattcaagatggatcgccaaggtgtgactcaagtattgtcc
cgtttgtcctacatagctgctttgggtatgatgaccagaatctcctctcagtttgaaaag
actaggaaagtgagtggtcccagatccttgcaaccatctcagtggggaatgctctgccct
tcagacactcctgagggagaagcttgcggtctagtgaaaaacctggcacttatgacgcat
atcaccacagatatggaggatgggcccattattaaactagcctttaatctgggagtagaa
gatgtaaatctgctgtgcggtgaagaactttcatatccaaatgtgttcattgtatttctg
aacggtaatatcttgggcgtaattcgtcaccatcagaaattggtaaaaacatttcgtctg
atgaggcgagcaggatacatcaatgagtttgtatcaatctctacaaatctgactgatcgc
tgtgtttatatttcttctgatggaggtagactttgcaggccttatatcatagtgaagaat
ggaaactcagctgtcagaaacaagcacatagaagagctcactcaaggctacaggtccttt
gaagattttcttcatgaaggtcttgtggaatacctcgacgtcaatgaggaaaatgactgc
tatattgcactttatgaggatatgatcaacatagatacgacccacttggagattgagccg
tttacattactgggagtttgcgctggtctgattccgtacccccaccataatcagtctcca
agaaacacatatcagtgcgctatgggaaaacaggccatgggcacaattggttacaatcag
cgcaatcgaattgacaccctcatgtacctgcttgcatatccacaaaaacccatggtgaaa
accaaatccattgaactgattgaatttgaaaagctgccagctggacaaaatgctacgatt
gcagtaatgagctatagtggttacgatattgaagatgctcttgtcctaaataaggcttct
ttggacagaggttttggaaggtgtctagtgtataaaaatgcaaagtgcacgttgaaacgc
tacaccaaccaaacatttgataaagtgatgggtccaatgctggatgcagctacacggaag
ccaatttggcgacatgaaattttggatgctgatggtatttcctcaccaggtgagaaagtg
gaaaaccggcaagtgctggtgaacaaatcaatgccaacagttacacagactcccttggag
ggaacagctcaatctcaacaacctcagtttcgagatgtcccaatcacctacaaaggagca
acagactcctatattgagaaggtgatgatctcctcaaactcggaggatgcattcttaatc
aaaatattactgaggcagacaagacgtccagagattggtgacaaattcagcagccgacat
ggccagaaaggtgtctgtggtttgattgtacctcaggaagacatgcctttctgtgatagt
ggaatttgtcctgatatcatcatgaacccacatggttatccgtcccgaatgacggttggg
aagttgattgagctactggcaggaaaggcaggggttctggatggcaggttccactatggc
accgcctttggagggagtaaagtgaaggatgtgtgtgaggatttaatacgtcatggctat
aactatctgggcaaggattatgtgacttctggaattacaggcgaacctttggaagcgtat
atctactttggtcctgtgtattaccagaagctgaagcacatggtgctggataagatgcat
gcaagagctcgaggtccccgagctgttcttaccagacaaccaacagaaggtcgatctcgt
gatggtggcttacgtcttggtgagatggaacgggattgcctgattggctatggagcaagc
atgttacttttggaaaggttaatgatctccagcgatgcattcgaggtggatgtttgtgga
cagtgcgggctgctgggttactctggatggtgccattactgcaagtcatcgtgccatgtc
tcttcattgcgtattccatatgcatgtaaactgctcttccaagagcttcagtctatgaac
attgtgcccagactgaaactgtccaaatacaatgaatga
DBGET
integrated database retrieval system
