Callorhinchus milii (elephant shark): 103183009
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Entry
103183009 CDS
T03088
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04020
Calcium signaling pathway
cmk04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103183009 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103183009 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103183009 (grin1a)
Ion channels [BR:
cmk04040
]
Ligand-gated channels
Glutamate (ionotropic)
103183009 (grin1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
103183009
NCBI-ProteinID:
XP_042193498
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All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MGGYPWLWVLLLSGWSRLPAPAGASPKIVNIGAVLSTKKTEGIFKEAVAQANRKYGTWKI
QLNATAVTHKPNAIQMALSVCEDLISSQVYAILVSHPPGQNDQLTPTPVSYTAGFYRIPV
IGLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFEMMRIFKWGHIILIVSNDHEGRAAQK
KLETLLEERESKNKKRNFEKTDQHSYDSRRGPKAEKVLQFEPGTANMTSILMEARELEAR
VIVLSANEDDAVTMYKTATILNMTGPGYVWLVGEREISGRAMQHVPEGVIGLQLINGKNE
SAHINDAVGIVAQSIHELFVKENITDPPRGCVGNTNIWKTGPLFKRVLLSSKYPNGFTGQ
VEFNDEGDRKFSNYSIVNVQKGKLVTIGVYNGTKILVNDKKIIWPGGELNAPRGFQMSTR
LKIVSIHQEPFVYVKPTMPDGTCKEEFMMNGEIIKKVICIGPNATVTGPLAGRPIIPQCC
YGFCVDLLVKLASTTTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLGGHADMI
VAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVV
AVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILG
MVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYF
RRQVELSTMYRHMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELF
FRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKNWVRYQECDFRSNAPATLTFENM
AGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKNGRAEPD
PKTKASFRSLTSTLTSSFKRRRSSKDTQYHPTDISGQLNLSDPSVSTVV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggggggctacccttggctgtgggtcctcctcctgtccggctggtcccggctcccagcc
ccggcgggcgcttcgcccaaaatcgtcaacatcggggcggttttgagcaccaagaagacc
gagggcatcttcaaggaagccgtggctcaagccaaccgcaagtacggcacctggaagatc
cagctgaacgccactgctgtcacccacaagcccaacgccatccagatggctctgtctgtc
tgtgaagatctcatcagtagccaggtctatgcaatattagtgagtcatccgcctgggcag
aatgaccaattgactccgacgcctgtgtcttacaccgctggcttctaccggatccctgta
attggtctgacaacaaggatgtccatctattctgacaagagtatccacctctccttcctc
cgcaccgtcccaccgtactcccaccaggcgcaggtttggttcgaaatgatgcgaatcttc
aaatggggccacattatcctgatcgtcagcaacgaccacgaggggcgggcagcgcagaag
aagctggagacgctgctggaggagagggagtcaaagaataaaaaaaggaactttgaaaag
accgatcaacattcgtatgacagcaggcgaggaccaaaggctgagaaagttctgcagttt
gaacctgggaccgcaaacatgacttcaatactgatggaagccagagaactggaggcacga
gtgatcgttctgtcagccaatgaagacgacgctgtgacgatgtacaagacagcaacgatc
ctcaacatgacggggcctggctacgtctggcttgtgggagagagagaaatatcagggagg
gccatgcagcatgtccccgaaggggtgatcgggctgcagctcatcaatgggaagaacgag
tcggctcacatcaacgatgcagtgggcattgtggcccaatccatccatgagctctttgtg
aaagaaaacatcaccgaccctcccagaggctgcgtgggcaacactaacatctggaaaacc
gggcccctcttcaaaagggtcctgctgtcctccaagtatcccaatgggttcacaggccaa
gtggagttcaatgatgaaggagatcggaagttttccaactacagcatcgtgaacgtgcag
aaagggaagctggtgacaatcggagtttataatggcacaaagattctggtgaatgataag
aagataatctggccaggcggggaactcaacgcacccaggggctttcagatgtcaactaga
ttaaagatcgtcagcattcatcaagagccctttgtgtatgtcaagccgacaatgccggat
gggacttgtaaagaagaattcatgatgaacggagagatcattaaaaaggtgatctgtatt
ggacccaatgccacagtgaccggtccattagcaggtcgccccattatccctcaatgttgc
tatgggttttgtgttgatttgctcgtcaaacttgccagcactaccacactcaactttacc
tacgaggttcatcttgtccatgatggaaagtttgggacgcaagaacgggtgaataacagc
aataagaaggagtggaatgggatgatgggagagctgctgggaggacatgctgacatgatc
gttgctcctctaactatcaacaatgaacgagctcagtatatcgaattctccaagcctttc
aaataccagggactcaccattctagtgaaaaaggaaattccccggagcaccttggactcg
ttcatgcagccttttcagagtacgctctggctcctggtcggtctctctgtgcacgtggtg
gcagtgatgttgtatctgctggacaggttcagtcctttcgggcgttttaaagtgaacagt
gaagaagaggaagaagatgcattgactctgtcttcagccatgtggttctcttggggggtg
ctgctgaattccggaatcggagaaggggctccgaggagtttttctgcccgtatcctgggc
atggtgtgggctggctttgctatgattattgtggcctcatacactgctaacctggccgct
ttcctggtgctggacagacctgaagagcgcatcacaggaatcaacgaccccaggcttcga
aatccctcggataaattcatctatgccacagtgaagcagagctctgtggatatctacttc
cgtcggcaggtggagctgagcaccatgtaccgacacatggagaagcacaactacgagagt
gcggctgaggctatccaggctgtgcgcgatgggaaactgcacgcgtttatctgggactcg
gcggtgctggagtttgaggcatcgcagaagtgtgacctggtgaccacaggcgagctgttc
ttccgatcaggttttgggattggaatgaggaaggacagtccatggaagcaggctgtgtcg
cttgctatactgagtttccatgagaacggttttatggaagacttggataagaactgggtc
agataccaggagtgtgacttccgcagcaatgccccagcaactctcacatttgagaacatg
gcaggtgtcttcatgttggtggctggaggaatagttgcaggaatattcctaatattcata
gagatcgcttacaagcgccacaaagacgcccggaggaaacagatgcagctcgcctttgct
gccgtcaacgtctggagaaagaacttgcaggatagaaaaaatggtagagcagagcctgac
cctaaaacgaaagcatcttttagatcgctcacttcaacactgacctccagcttcaagaga
cgtaggtcttccaaagacacgcagtatcaccctactgatataagtgggcagctgaacctt
tcagacccttcggttagcacagtggtgtga
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