Cucumis melo (muskmelon): 103488429
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Entry
103488429 CDS
T03195
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103488429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103488429
Enzymes [BR:
cmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103488429
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103488429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103488429
NCBI-ProteinID:
XP_008445376
UniProt:
A0A1S3BCJ8
LinkDB
All DBs
Position
3:complement(25853088..25881705)
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVKFKENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGK
PELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPI
MLKSKLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPMSMVRNSFS
DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT
NDHEIYASLTSCYSDKHGKSKGAVATQLVGERAKIILDEVRDLALFDRRQCLDHIGQHFQ
PVMEGLGKEKFSTVADAVLKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSL
QNQDVLLPGQLITLYLKEKLEDWLQKSKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSK
QISSAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVL
IAVGMIPSLPKLVQMGPPDVLNVLLDGRLVGYISSNEVEKVVAHLRRLKVLSPHVIPDDL
EVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDG
GDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRY
RADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEP
YCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSR
HGQKGVCSQLWPDIDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFV
NATPFRSSVKKTNAGDGETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLL
HDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKG
METVAMPYVFKYLAAELAAMNIKMTLELSNGAV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaatttaaagagaacgaagactatgaggcgttgcgcgagctgttcagacac
catatagaatcgtttgatcacctcgtcgatgccggattggagacacttatgaacagcatc
aaacccgtcgaaatttacgactcattcaccaacaaaaagcttagaatttggctgggtaag
cctgagttatacccaccacagaaggagcgcaatttgagaacaatacgggaagctcttctt
ccttatgaatgtaggcaagctaaaatttcatataccggaaagttcatggcagatgtttgt
tttcaatacgatgaaaaagctgtcataagagagaagtttaactttgggcaatttccgata
atgctgaagtcaaagctttgtcacttgagaggtcttgatcccaagaagttggtctcctac
aacgaagaggcatcagaaatgggtggttatttcgttatgaatgggttggagagagttgtt
cggcttttgatagcacccaaacgaaactatccaatgagcatggtgaggaattcattttct
gatcgacgggaaggttatactgataaggcagtggttataaggtgtgtaagagaagatcaa
tcttcagtaacagtcaaattatattatcttaggaatggaagtgccagacttggattttgg
gttcagggaaaggagtacttgcttcccataggggtcgtcctaaaggccctaattgacaca
aacgaccacgaaatatatgcaagtctgacaagctgttatagtgacaaacatggaaagagt
aagggtgctgttgcaactcagctcgttggtgaaagggcaaagattattcttgatgaagtt
cgagacctggcactttttgatcgtcgtcaatgtctagatcatataggacaacacttccag
ccagtcatggaggggctgggaaaagaaaaattctctactgttgcagatgcagttcttaaa
aactacatatttgttcacctcgacaacaattatgacaagttcaatctgcttatttttatg
gcacagaaacttttctcccttatagatcagacttctgtacctgacaaccccgattccttg
cagaaccaggacgttctgctacctggtcagctaattactctttatctcaaggagaaactg
gaagactggttgcaaaagtcgaaaaagcttcttgaagatgaaattagtaatcccagcaaa
aattttgaattctgcagcttagctcatgtgaagaaggtcatggacaagaatccatcaaaa
cagattagttcagctgttgaaaatatgttgaaaactggaagactcgttacacaaactggc
ctagatctgcagcagagagcaggctttacagttcaggcagagcgacttaatttcttgcgc
tttgtgtctcattttcgtgctgttcatcgtggagcttcgtttgctggacttcgcactaca
actgtgcggaaattgctacctgagtcttggggttttctttgtccagtacacactcctgat
ggtgaaccatgcggcttgctgaatcatttaaccagcacctgcagaattacgtcatacttc
aattctcaaggaaaagttcgagacttttacaaaataaggacgtctattctaagtgttcta
attgcagttggaatgataccgtcactaccgaagcttgttcaaatgggtcctcctgatgtt
cttaatgtgcttttagatggtcgactcgttggttatatatcatccaatgaagtagagaaa
gttgttgctcatttacgtcgattaaaagttttatctccccacgtgattcccgacgatctg
gaagttggatatgtacctttgagtataagtggagcatatcctggtttataccttttcaca
tctccttctagatttgtccgaccagttaaaaatctttcaatctcccctgaggataatcac
aatattgaactcatcggcccatttgaacaggtgtttatggaaatacgatgccctgatggg
ggtgatggtgggaggaaagatgagtttcctgcaacacatgaagaaatccatccaactggg
atgctcagtgtggttgctaatcttaccccttggtccgatcacaatcagagcccacgtaat
atgtaccaatgccagatggcaaaacaaacaatggcattctctctgcaagctattcggtac
cgtgcagatcaaaagctataccatcttcagactcctcagacccctattgttcgtacaagc
acatatacgaaatacaacatagatgaatatccaactggcacaaacgcaatagtggcagtg
ttggcatatactggttatgacatggaggatgcgatgattctgaacaagtcctctgtggag
cgtggaatgttccatggacaaatatatcagacagaaactattgacttgtctgatcagggc
aataggtcaagtcgaagtcagaagatgtttaggaggagtaatattgatacatctgtgcga
tctatcatagatgcagatgggctgccttatgttggtcagatgatacaaccagatgagcct
tattgtagcatttatgatgaggtggctggcacaaccagaaccatgaaacttaaaggttca
gaagctgttattgttgattatgtgtctgttgatgtgaagaataagaataacccccaaaag
gtgaatatacgcttccggcgccctcggaatccaatgattggagataaatttagtagtaga
catggacagaaaggtgtttgctcccagctatggccagatattgatatgccattttgtgga
gctacaggaatgcgcccggatttgattatcaatccccatgcttttccttcaagaatgaca
atagcaatgttgatggagtctgttgctgcgaagggagggtgtttaaatggagagtttgtt
aatgcaacaccatttaggagttctgtaaagaaaacgaatgccggagatggagagacaaac
gccgagacacttgttgatgaacttgggtctacgttaatcaaaaagggatttaattaccat
ggtcttgaggtattgtacagtggagtttatggaacagagctaacatgtgaaatttttatt
ggacccgtatattatcagcgtcttcggcacatggtttctgacaaatatcaggttcgttcc
actggaaccgtggatcaagtaactcggcaaccaatcaaaggtagaaaaaaaggtggtggt
atacgttttggtgaaatggagcgcgactcaatgctagcacatggagcatcatacttgttg
catgataggcttcatacatgttctgatcatcacattgctgatgtatgttcactctgcggc
agcattctaacatcatctttcgtccagcccccaaagcgtgctgtgcgtgaaataggcggg
ctccctcctgggaaggctccgaaaagggttacgtgtcatgcttgcaaaacaagtaaaggt
atggagacggtagcaatgccttatgtcttcaagtacttggctgcagagttggcagcgatg
aacataaaaatgactctcgaactaagcaatggagcagtctga
DBGET
integrated database retrieval system
