KEGG   Cucumis melo (muskmelon): 103493748
Entry
103493748         CDS       T03195                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103493748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103493748
Enzymes [BR:cmo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103493748
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103493748
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 103493748
NCBI-ProteinID: XP_008452849
UniProt: A0A1S3BUT1
LinkDB
Position
7:841716..849772
AA seq 1197 aa
MGTSGTKDDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNINDLGEAFLKDFCKKSSMAFF
NQYGLISHQINSYNDFIKNGVQKAFDFFGDILVQPGYDPSKKGDGEWRYASVKFGKVTLD
KPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVD
KEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEFDRGGYFLIKGAEKIFIAQEQI
CLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWIL
FFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEIR
KTSFPPAEKIEDCLNLYLFASLKGLKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRF
ELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVRPIEHYLDASIITNGLSRAFSTGA
WAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFL
STPDGENCGLIKNLSGTGLVSLNTTKPIIPTLFCCGMENLADNTSTSLCGKYRIFLDGEW
VGVCEDSLSFVTKVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRI
DKSKGENYTFQSLLDKGIIELVGTEEEEDCRVAWSIKHLMEDEGTTKYSHCELDMSFLLG
LSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTA
DCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHT
RSYKAEVDNKESSEKRRKSDDTINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVL
GFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTP
SVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGP
VHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA
SVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3594 nt   +upstreamnt  +downstreamnt
atggggacatcagggacaaaggacgatatagagatgaatagcgagggggaagacttatca
cctggaatggatttggatacagatgatgatgatgattattattctgagccagtcaacata
aatgatctgggggaagcatttctgaaggatttttgtaagaagtcatcaatggcatttttt
aatcagtacggccttatcagtcaccaaatcaactcgtacaatgacttcataaaaaatggt
gttcagaaggcctttgatttttttggtgacattttagttcagccaggatatgacccctct
aagaaaggagacggggagtggagatatgcttcagtgaagtttggtaaggtgacccttgat
aagccaaagttctggggtggtgcagcaagtggaaaagagtataacatgcttcctaggcat
gctcgacttcagaacatgacttattcatcaaggatgaaaataaatatcagtttagagata
tatactcaaaagttagtcagcagcgacaaatttaaaactggaaaagatcaatatgtcgac
aaggaacctgtagaaggtgccagtgacaacagggatgtttttatcggcagactacctgtg
atggtgaattctgacctctgctggatgaaggatgagcagaaacgtgactgtgaatttgat
cgtggaggttattttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatt
tgtttgagaagactctggatttctaatgttcaaggctggactgtggcatacagatcagaa
gttaagagaaatagactaattattagactagttgaaaattccaagtctgaagatctaaaa
agcaaggagaaagtcctcaatgtttattttttgtccacggaagttcctgtatggatttta
ttctttgcacttggtgtttcatcggacaaagaaatagtagatttaattgattatggcagg
gatgatccgactgttctgaatattctctttgcctctgttcgtgaagttgataatgatgat
aagtggaaagactttcgaagaggtaaaagagcattaacttttttggacaatgaaattaga
aagaccagtttcccacctgctgaaaaaattgaagattgtctgaacctgtatctttttgcc
agcttgaaaggcttaaagcaaaagtgtcatttccttggttatatggttaaatgtctcctg
caagcctatactggccgtaggaaatgtgacaatagggatgattttcgcaataagaggttt
gagttggctgcagaactgcttgaaagagagcttaaagtacatattgcacatgcacgtaga
cgcatggaaaaagctttacaaagggacctctatggggatcgtcaagtgcgtccgatagaa
cactatttggatgcttccataatcactaatggtctatcccgagcattctctactggagca
tgggcgcatgcatttaagaggatggaaaggatttcaggtgtggtggctactcttggtcgt
gctaatcccttacagacaatggcggagttgaggagaacacgtcaacaggttgcatacact
gggaaagttggggatgcaagatacccgcatccttctcactggggaagggtttgctttctc
tccactccggatggtgaaaattgtgggcttattaaaaatttgtccggcacaggacttgta
agcttaaacacgacgaaaccgataattcccacattgttttgctgtggaatggagaatttg
gcggacaatacatctacttctctttgtgggaagtacagaatttttcttgatggggaatgg
gttggagtttgtgaagattccctttcatttgtcacgaaagtgagacgcaagcgacgaaga
aatccgtttctgcatcaggtagaagtcaaaagagatgaacaactgaaagaagtacgtata
ttttccgatgctggaaggatattacgtcctctcctagtcgtagagaacttaaataggatt
gacaagtctaagggagaaaactacacttttcaatcccttttggacaagggaataatcgaa
cttgttggaactgaagaagaagaagactgtcgtgtagcttggagtattaagcatcttatg
gaagatgaagggaccacaaaatattcccattgtgaacttgatatgtcatttttattaggt
ttgagctgcggacttgtcccttttgcaaatcacgaccatgccagaagggctctgtttcaa
tcccagaagcactctaatcaagctattggattttcaacaaccaattctaattttcgtgtg
gatactttatcccaccagttacattatccacaaaggccactttttcgtacaatgactgct
gattgccttggaacacctggatacctgtcatctcacaccggtatactccccaaacccgag
ttctataatggtcagaatgctattgtggcagtcaatgttcacctgggttacaaccaagaa
gattcattagtaatgaacagagcctctcttgagcgtggcatgtttcggtctgagcatacc
cggagttacaaggctgaggtagataataaagaatcttcagagaagaggagaaaatctgat
gatacaataaattttgggaagactcaaagtaaaattggaagagttgacagcttagatgac
gatggcttcccttatattggcgcaaatttgcagagtggagacattgtcattggtagatgt
gcggaatctggggccgatcacagtatcaaactgaagcacactgagaagggcatggttcag
aaagttgtgctctcttctaatgacgacgggaagaactatgctgttgtatccctcagacag
gttcgatctccttgtcttggagacaagttttcaagtatgcatggacaaaagggagttctg
gggtttttggagtctcaagagaatttccccttcaccatccaggggatagttccagatatt
gttataaacccacatgcttttccttcgcgacagactcctggtcaactattggaagcggct
ctcgggaaaggcatcgctgctggcggttctctgaaatacgcaacgcctttctcaactcct
tctgttgatgccattaccgaccagcttcacagggcggggttttcaagatggggaagcgag
agagtgtacaatggccgaactggtgaaatgatgcgatctctcatattcatgggtccaacc
ttctaccagcgcttaatccacatggctgaagacaaggttaaatttcgcaacaccggccct
gtccaccctctcacccgacaacctgttgctgaccgtaagcgttttggtgggatcaagttt
ggggagatggaacgtgattgtcttatagcccatggtgcctctgccaacttgcacgaacgt
ctgtttaccctcagcgactcttcccagatgcacgtttgccagaaatgcaagaatgttgct
agtgtgattcagcgatcagtggctggtggtcgtaagataaggggtccatattgtcgggtt
tgtgaatcagtcgatgatattgtaagggtaaatgtaccctatggagccaagttgttgtgc
caggagcttttcagcatgggtatcaatctcaagtttgaaacacaactttgttga

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