Cucumis melo (muskmelon): 103493825
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Entry
103493825 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103493825 isoform X2
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103493825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103493825
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103493825
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103493825
FA (Fanconi anemia) pathway
Downstream FA components
103493825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
Pex19
Motif
Other DBs
NCBI-GeneID:
103493825
NCBI-ProteinID:
XP_008452980
UniProt:
A0A1S3BV35
LinkDB
All DBs
Position
7:305564..324376
Genome browser
AA seq
1237 aa
AA seq
DB search
MVYAKGGTNPKSKTNPTYQLTKNVYPIGGIQVEFPYRPYGSQLAFMGRVISTLDRAQREG
HCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQDANSSHTKPAPEAATDPLGFGGGFLP
EVQTSMSTDTESSLPGPNNKSQKKKTAPTIYYASRTHSQISQVIREYRKTSYRVPMAVLA
SRKHLCTNPYVRGKDNLDEECKLLLKDQDAGCSEFKNANKVKCHPTLQKGGCHEVHDIED
LVKVGEAVKGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIE
DIARHGGSVDIEEDTLNKLQMELEQLCPFNSLVYQPLYEMTQDLTSWIDQRKTTLQKREF
QHYVTCWTGNHAQRELQEANITQQCFPILLECATKAIKAASDTESDDAHLSGLSVITLEG
LFSSLTYFFSRNGCHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCFNPAVVFRDIGDLS
LSVILTSGTLSPMNSFSSELGVQFGTSLEAPHVIDVESQVWPAIISTGPENYPLNGSYKT
ADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLQKRWSETGQWSRLNARKSLFVE
PRGGAQEDFDSILKGYYDTIRLGDNFAVGKKSRGKKVKPNHSYVVGCENSKEGAALLAVF
RGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVALKKKFNDTYKMSKNLLSGNEWYCQQA
FRALNQAAGRCIRHRFDYGAIVLLDERFQEERNRTYISKWLRKSIKQFDNFEQSMEELKS
FFSHIKERISNNTESELPNSENEEHIISTFPSSCRRTKMEKIDKFNHHGQKAHEDAKNCI
IDLECSVETETRNHEFLSMNTVLEVPDSPIVQETPCVDIVGATSPGESKDERSTSTVIEA
YSELSDQLSYHSKPLVKSTRSPLTSETSILHTPERNVSVNAYSFARDTESSLNTSVNSHT
QKRRKSIGITITKLAQEEFLTDPRTKNPEYNSVDRSSIISRNLTSPKDTNYETLLTEKKS
NSLNVTRVPKLNDTVPVCLSSGLPMDKKLYLSCALCRSPLGRPENHLNITCSFTVSSKTH
LVSIYKERFKAQTANSSASVQLIITDILFVNQRLLVRSSKNSGRGIWSEEDGCVYNYVFC
PFCCSDNCIGVQIMATDASNIPLLNKVMFYVECLEIQDLKADTGKALVNKEVSPVGSSAK
NKYAVMEPIENFSYSPSPLTSGGWRSTKLKVRRKGTS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgcaaaaggggggacgaaccccaaatccaagaccaatccaacttatcagctc
acgaagaatgtgtacccgattggtggcatccaagtggaatttccataccgaccatacggt
tcgcagctggcgttcatgggcagagttatatccacccttgatcgagctcagcgagagggc
cattgccacgcattactggaatctccgactggaaccgggaagtcgctttcacttctctgc
tcgagtcttgcttggcagaagaattacaagataaagaatcaggatgctaattccagtcac
acgaagcctgctccagaggctgccacagatcctctcggttttggcggtggatttcttccc
gaagtgcagacgtcaatgtctacagatactgagtcatctcttccagggccaaacaacaaa
agtcagaagaaaaaaacagccccgaccatatactacgcctcgagaacacattcacagata
tcacaggtgatccgtgagtatagaaaaacttcctatcgagtgccaatggcagtgttggcg
tcaaggaaacatctatgcacaaatccttatgtacgagggaaagataatttagatgaagaa
tgcaaactacttttgaaggatcaagatgcaggatgcagcgaatttaaaaacgcaaacaag
gttaaatgtcatccaactcttcagaaaggaggatgtcacgaggttcatgacattgaagat
ttggtgaaagttggagaagctgtaaaaggttgttcatattatgcagctcgctctatggca
gacgacgcacagctggtgttttgcccatatagctatattatcaatccagttattcgagga
gcaatggatgtagacattaagggtgcaattgtgatttttgatgaagcccacaatatagag
gatattgcacgtcatggtggtagtgtggatattgaagaggatactttaaataaattgcag
atggagttagagcaactatgtccttttaattctttggtttaccagcctctgtatgaaatg
acacaggatctcacaagttggattgaccaaaggaagaccacattgcagaagcgcgagttt
cagcattatgtcacctgctggactggcaatcatgctcaaagggagctccaagaagctaat
ataactcaacaatgctttcccattttgcttgaatgtgcaacaaaggctattaaagcagct
tcagatactgagtcagatgatgcacatttgagtggcctgtcagtgataaccctggaagga
ttattctcttcactgacatatttcttctcaagaaatggttgccacatgtctgactaccag
cttgcattacaacgctacattaaaagagatcctggaaaagcttatgctgaatggacggtt
actttaagtttgtggtgctttaatccagctgttgtatttagagacattggtgatctttcc
ttgtcggttattttgacatctgggaccctgtcacctatgaattccttttcatctgaacta
ggagttcagtttggaacttcactggaagctcctcacgtgattgatgtggaatctcaggtg
tggccagctattatatcaactggtccagaaaactatccgctgaatggaagttataaaaca
gctgatggatatgcattccaggatgctctaggaaaatcattggaggagatattttttatt
gctcctggtgggtgtcttgtgttcttccccagttataagctgatggaaaaactccaaaaa
cgttggtctgaaactggtcaatggtctcgactgaatgcaaggaagtctctttttgtagag
ccaagaggaggagctcaagaggattttgattccatattgaaaggttattatgatactata
cgtcttggtgataactttgcagtcgggaagaagagtcgaggtaagaaggtcaaacccaat
cactcgtatgtcgttggctgtgaaaattccaaggaaggagcagcactccttgcagttttt
cgaggaaaggtttcagaaggaatagacttttctgatgataatgctagagtggttataata
gttggtattccatttccaaatataaatgatattcaagttgcattgaagaaaaagttcaat
gacacatataaaatgtccaaaaaccttttaagtggaaatgagtggtattgtcaacaggcc
ttccgagctctaaatcaagctgcaggacgttgtattcgacacagatttgactatggtgcc
attgtgctattagatgagcgtttccaggaagagaggaacaggacttacatttcaaagtgg
ctaagaaaatccattaaacaatttgataattttgaacagtctatggaggagctgaaatcc
tttttcagccatattaaggagcgcattagcaacaatacagaaagcgagttaccaaattct
gagaatgaggagcatattatttctaccttcccaagtagttgtagaagaacgaagatggag
aaaattgacaagtttaatcatcatgggcagaaagctcatgaagatgcaaaaaactgtata
attgatctggagtgcagtgttgaaacagaaacaaggaaccatgagtttctatctatgaat
accgtccttgaagttccagattccccaattgttcaggagactccttgtgttgatattgtt
ggcgccactagtccaggagaatccaaagatgaaagatcaacttcaactgtaattgaggca
tattctgagctttctgatcaattatcatatcattcaaaacctctggtcaaatcaacaaga
tctcctcttacatctgaaacttcaattctgcatactcctgaaagaaatgtttctgtgaat
gcctacagctttgcacgagatacagaatcttctttgaatacgagtgtaaattctcatacc
cagaaaaggaggaagtctatcggtataactattacgaaacttgctcaagaagagtttctt
accgatcccagaaccaaaaatcccgaatataacagtgtggacagaagctcaataattagc
agaaatttaactagtccaaaagatactaattatgaaactcttctcacggaaaagaagtct
aacagtttaaatgtcacacgagtgcccaagctaaatgatactgttcctgtttgtctgtcg
tctggtcttccaatggacaaaaagttgtatctgtcttgtgcactttgtagaagcccactt
ggtcgcccagagaaccatttaaacataacgtgctcatttactgtatcatcaaaaacacac
ttagtatcgatatataaggaaaggtttaaagctcaaactgccaattcatcagcaagtgta
cagcttatcattacagacattttgtttgttaaccagaggctcctagttaggtcttcgaaa
aattcaggacgtggtatatggagtgaggaggacggctgtgtatataattatgtcttttgc
cccttctgttgcagtgacaattgcattggtgtacagatcatggcaactgatgcatcaaat
attccattacttaataaagtgatgttttacgttgagtgtttggagatccaggaccttaaa
gctgatacaggaaaggctttagtaaacaaggaagtatcacccgttggtagctcagctaag
aataagtatgccgtcatggaacccattgaaaatttttcatactcccctagcccgctaacc
tcaggcggctggaggtctactaaattgaaagtcagaaggaaaggaacttcatga
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