KEGG   Cucurbita moschata (crookneck pumpkin): 111449252
Entry
111449252         CDS       T05248                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020  RNA polymerase
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111449252
  09124 Replication and repair
   03420 Nucleotide excision repair
    111449252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111449252
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111449252
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111449252
  RNA polymerase III system
   RNA polymerase III
     111449252
  RNA polymerase I system
   RNA polymerase I
     111449252
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111449252
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111449252
NCBI-ProteinID: XP_022944842
UniProt: A0A6J1FZ93
LinkDB
Position
Unknown
AA seq 143 aa
MADDDYNDVDMGYEDEPPEPEMEEGAEEELDNNNADDVPGEPVEAEDKEDEEPIERVRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGA
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggatgacgattacaatgacgtcgacatgggatatgaagatgagccaccagagcct
gagatggaggaaggagctgaagaagaattagataacaataatgccgatgatgttcctggt
gaacctgttgaagcagaggataaggaagatgaagaacctattgaacgtgtgcgtaaaacc
tcaaaatttatgacgaagtacgaacgtgctagaattttgggtactcgtgccctccaaatc
agcatgaatgctcctgtcatggtcgagttggagggtgagactgatccacttgagattgca
atgaaggagcttcgtgagcgtaagatacctttcaccattcgtcgctacctaccagatgga
agttatgaagactggggcgttgatgaacttattgtggaggactcctggaagaggcaagtt
ggtggcgcttga

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