Cucurbita moschata (crookneck pumpkin): 111449942
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Entry
111449942 CDS
T05248
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111449942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111449942
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111449942
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111449942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111449942
NCBI-ProteinID:
XP_022945802
UniProt:
A0A6J1G1X8
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MVVKPSDDDSKNGKQVDDPNAIGSDIDKQFLGLPIKSAVDKFQLLPEFLKVRGLVRQHLD
SFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRVGEPSVTMNAVSESISPHMCRLSD
LTYAAPILVDIEYIEEHHAQKAPREKKDVVIGRMPIMLRSRCCVLYGKDEAELARLGECP
LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
IYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE
QALEYLETKVKKFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFLPKCIYVGVMMRRMM
DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFD
FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE
DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH
CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNA
LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ
LKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPN
DVYVNKQTPMITKGTPLPGIPDSAYRPCKQIFKGSEGEPTVIDRVALSTDKNDCLCIKFL
IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI
ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDILYSGITGCPLQ
AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
ASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSSCKNGDNISTMKLPYACKLL
IQELQSMNIVPRLKLAEA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgaagccgtcggacgacgattcaaagaacgggaagcaagtcgacgatcctaat
gcaatcggttcggacattgacaagcaattccttggccttcctatcaagtcagccgtcgac
aagtttcaacttcttcctgaatttttgaaggtaagaggtctggttcggcaacatttggat
tcctttaactacttcgtgaatacagaaattaaaaagatagtcaaggccaatgatcgaatt
gaatccagcaccgatccgagtatttatcttaggtttctagatgtaagagttggcgagcct
tctgtgaccatgaatgctgtcagtgaatctattagtcctcatatgtgccgcttatctgac
cttacatatgccgctcctatactagttgatatagaatacatcgaagaacatcatgcacaa
aaagccccaagggagaagaaagacgtggtcattgggaggatgcctataatgttacgaagc
cgttgctgtgttttatatggaaaagacgaggctgaacttgcaagacttggtgagtgtcca
cttgatcctggcggctattttgtaatcaagggcaccgagaaggtagtcttgattcaagaa
caactttcaaagaacaggattatcattgatactgacaaaaaggggaatataaatgcatct
gttacaagcagcacagaggcaacaaaaagtaaaacagttattaaaatggaaaatgagaag
atctatctccagctcaatatatttaccacaccaaagattcccattgtggtggtcttgaag
gctatgggaatggagagtattcaagaagttgtgcaaatggttggaagagatcctcgatac
ggggccctacttcttccatcaattgaggaatgtgcgaaggaaaaaatatatacacaagaa
caagcattagagtatcttgagacaaaggtgaagaagtttcaattttttagtgctcctcca
gaaaaggaaggaagggctctagggatacttcgtgatgtttttcttgccaatgtcccagtc
cataaaaataactttcttccaaaatgcatatatgttggcgtcatgatgagacggatgatg
gatgcaattttaaataaggatgctatggatgacaaggattatgtgggcaacaaacgtttg
gagctatctggtcagttgatctcgttactttttgaggatttattcaagacaatggttagt
gaagtgaagaagacagttgataagcttcttggaaagcacagtaggtcaagtcggtttgac
ttctctcagcatctgaattcgaacattatttcttttgggctagaaaggaccctttcaact
ggtaattgggatgttaaaaggttcaggatgcaccggaaggggatgagtcaggttcttgct
aggttatcttttatttctactatgggtcatgtgactagagtctccccacagtttgagaag
tccaggaaagttagtggaccaagagcactacaacctagtcagtggggtatgctttgtcca
tgcgatactccagaaggtgaggcttgtggacttgtaaaaaacttggctctgatgactcat
gtaacgacagatcaggaagaaggcccattaatttctttgtgctactgtttgggtgtcgaa
gacttggagcttctttctgcagaagagctacatacaccaaattcatttcttgttattttc
aatgggcgtatccttggcaaacatcggcggcctcagtactttgctactggtatgagaatg
ctgaggagagctggaaaaattggcgagtttgtcagtgtctttgtgaatgagaagcagcac
tgtgtatacattgcttctgatggaggacgagtttgtcgtccgcttgtcattgctgacaaa
ggtgtatcgaggattaaagaataccatatgaaagagttatcggatggagtccgtacattt
gatgattttttacgggaaggtttaatcgagtatcttgatgtgaacgaggagaataatgct
ttgattgctttgtatgaaggagaagctacaccagaaacaactcatattgagattgagccc
ttcaccatattaggcgttgtagctgggttaattccatatcctcatcataaccaatcgcct
agaaacacatatcagtgcgctatgggaaagcaagccatgggaaacatcgcatacaatcag
ttaaaacgaatggacacattactgtacttgctggtgtatccccagaggcccttattaaca
acgaggactattgagctggttggatatgacaagcttggagcagggcagaatgcaactgtt
gctgtcatgagttacagtggctatgatatagaggatgcaatcgtcatgaataaatcgtca
cttgatcgtggttttggtcgttgtattgtttttaagaaatattcttctgtcaatcagaag
tatgaaaacaacactgctgacaggatagtcaggccgaatagaaacgaagattattcggga
aatatgcagatattagatgatgatggacttgctgctccgggagagattattagaccaaac
gacgtttatgtcaacaaacaaacccccatgataacgaaagggacacccttaccaggaata
ccagatagtgcgtataggccttgtaaacaaatatttaaaggttctgaaggagagcctacc
gtgatcgatagagtggctctttctacagataaaaatgactgtttatgtatcaaattcttg
attcgccagacccgtagaccagagcttggtgataagttcagtagcagacatggacaaaaa
ggtgtatgtggcacaattgttcaacaagaggatttcccattttctgaacgtggaatttgt
ccagatctaattatgaatcctcatggattcccaagtcgaatgacagtggggaagatgatt
gaactcctaggaggaaaagcaggggtttcatgtggtaggtttcactatggtagtgcattt
ggagagccaagtggtcatgcagacaaagttgatgctataagcgagactcttatcaagaga
ggcttcagttacaatgggaaagacattctttactcaggaatcacaggttgcccattacaa
gcatatatatttatgggaccaatttactaccagaagttaaagcacatggtcttggacaaa
atgcatgctcgaggtagtggtccacgtgtcatgttaactagacaaccaacagaagggaga
gccaggaatggaggacttcgagttggagaaatggaacgcgattgtttgattgcgtatggt
gctagtatgctgatttttgaacgtttaatggtctcaagtgatcctttcgaagttcaggtc
tgcagagtttgtggtttgttgggatattacaaccacaagctaaaagcgggaatctgttct
tcatgtaaaaatggagataacatatccaccatgaaacttccatatgcgtgcaagctccta
atccaggaacttcaatctatgaatattgttcctcgcctaaaactagccgaagcctga
DBGET
integrated database retrieval system
