Cucurbita moschata (crookneck pumpkin): 111452531
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Entry
111452531 CDS
T05248
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111452531
Enzymes [BR:
cmos01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111452531
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111452531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
111452531
NCBI-ProteinID:
XP_022949069
UniProt:
A0A6J1GBS1
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All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MEDIEDLLIGGGGGGAPPGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK
IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM
DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI
NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE
IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC
GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGHETMLGTSALVKITSVGR
WSVFGEVIETIVTKHHKTTALEDMPIQAKVPPCSDAHETCACSVEPEACACGPESCCKGP
VALDEKDDSSRNIPLPEEPKRKNLVEWLLRKRKSHAPKREERESPVVSERKQASAGGSMD
EWGVVDRILVGGILISIFTIVGLLFHLGSTTLSSS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagacttgctcatcggcggcggcggcggcggagctccccctggttac
cgacttccaatatccgccgtcggcgtaaagccgaagaagaagaataagctgaaatctaat
cctgatgctgatgattccagcagcgggctttttccaacccaaaatctacttgcacctaag
attccaggcactcagacaatttatgttaaaacctttggatgttctcacaaccagagtgac
agcgaatatatggctggtcagctttcagcatttggttatttgttaagcgagaatcctgaa
gaggcagacttgtggctcataaatacttgcacagttaaatcccctagtcagtctgctatg
gacactctaataacaaaatgcaaaaatgcaaaaaagcctcttgtggtagctgggtgtgta
ccacaaggtagtcgagatttaaaggagctagaaggggtcagtatagtaggagtccagcag
attgaccgtgtggtagaagttgtggaagagacactgaagggtcatgaagtaaggctattg
aatcgcaagacactgccagcgcttgacctcccaaaagtgagaaagaacaagttcatcgaa
atactaccaatcaatgttggctgtttaggtgcttgcacttattgcaagacaaaacatgct
cgtggtcacttgggaagttacacagtagatagccttgtaaatcgtgtaagaactgtcatc
aatgaaggagtccgggaaatatggttgagcagtgaagatactggggcatatggccgtgac
attggggtcaatcttccaattttgttaaatgcaattgttgccgagcttcctcctgatgca
agcacaatgcttcggattgggatgacaaatcctcctttcattcttgagcatttgaaagag
atagctaatgttttgtgtcatccatgtgtatactcctttttgcatgtgccagttcaatct
gggagtgacacaatcttaagtgcaatgaatcgagaatatacagtcagtgagttcaggact
gtagtagataccttaactgagcttgttcctgggatgcaggtcgcaactgatataatatgt
ggatttcctggggaaacggatgaagatttttgtgaaactatcaaccttattaaagagtac
aaattaccccaagttcatatctcacagttctatcctcgaccagggacacctgctgctagg
atgaagaaagttccaagtgctattgtcaagaaacgaagccgcgagttgacttcagttttt
gaagcttttactccatataatggaatggagggcagagtggaaagaatttggattacagaa
attgcagctgatggaattcacttggttggccataccaaggggtacatacaggtgctagta
attggccatgaaactatgctgggaacttctgctttggtgaagataacatccgttggaaga
tggtctgttttcggggaagtgattgaaaccatcgtcaccaaacatcataaaacaactgct
ctcgaagacatgccgattcaagccaaagttcctccctgctctgatgctcatgaaacatgt
gcatgttccgtggaacccgaagcttgcgcttgtggaccagaaagctgctgcaaaggacca
gttgctctggatgagaaagatgattcttcaagaaatatcccattgcctgaagagcccaaa
cggaagaatctggttgaatggctattgcggaaacggaagagccatgcgcccaaaagggag
gaaagggaaagtccggtagtgtccgagagaaagcaggcatcggctggaggaagcatggat
gagtggggcgtcgtcgataggattcttgttggaggaatactaatcagtatcttcacaatt
gttggtctgctgtttcatcttggatccacgacactctcctccagttga
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