KEGG   Cucurbita moschata (crookneck pumpkin): 111460591
Entry
111460591         CDS       T05248                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020  RNA polymerase
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111460591
  09124 Replication and repair
   03420 Nucleotide excision repair
    111460591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111460591
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111460591
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111460591
  RNA polymerase III system
   RNA polymerase III
     111460591
  RNA polymerase I system
   RNA polymerase I
     111460591
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111460591
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 111460591
NCBI-ProteinID: XP_022959553
UniProt: A0A6J1H699
LinkDB
Position
Unknown
AA seq 206 aa
MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAK
RNDSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK
FHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtgctagcagaggaggaaatcaccaggcttttcagagttcgaaaaactgtgttacaa
atgcttaaagaccgaggctacttcgttggagactttgaggttgacatgtccagagagcaa
tttaagaataaatatggtgaaagcatgaaacgagaagatatcgtgatcaacaaagcgaag
agaaatgatagctctgatcagatatacattttctttccagaagaaccgaaggttggtgtc
aagacaatgaaaacgtataccaaccgcatgaaatcggagaatgtttttagagcaatattg
gtcgttcaacagaatttgacccctttcgctcgcacctgcataagtgaaatatctaccaaa
ttccacttggaagttttccaggaagcagaattgctagttaatatcaaagatcacgttctt
gttcctgagcaccagttactttccaacgaagagaaaaagacactattggaacgatatacc
gtgaaagaaacacagctaccgcgcatacaggtgaccgacccagttgcgagatactacggg
ctaaagcggggacaagttgtgaagatcatcagaccaagtgagactgcaggaagatatgta
acttacagatatgttgtctga

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