KEGG   Cucurbita moschata (crookneck pumpkin): 111462835
Entry
111462835         CDS       T05248                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111462835
Enzymes [BR:cmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111462835
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    111462835
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc LAMTOR
Other DBs
NCBI-GeneID: 111462835
NCBI-ProteinID: XP_022962370
UniProt: A0A6J1HGW7
LinkDB
Position
Unknown
AA seq 2160 aa
MASGSPPSRIDQFYASKKRNPLTPSLKSGSYDKDGKRSLEGSPGTKGTLDNYLVTYLGND
NPSHSVRENLSGQELVKRNLLLKINSSSRNEHEEPTLSKGFHTSEATEGIKKRTLEDSYE
TRSSAVKSMASGWGVTPCMEKPELKQFAADFLSLYCSSELQTTVSSPVEQKVTFKRHSSP
SLLEGEAKLPKKLHMMAGPSNAKGETDSLSALSDGNKQSNFFVETGDTDNHHPVALKACL
QKCNKAPISPYCLTECRTPGLSTANACFRETPKSGSSSFSPGEAFWKEAIVFADGLCAPS
IDLTSYDAEGSNPAEGQSNTKKLLIPGEPTQKRLKGQFGGGSGGVRLGEPGASIVSLRSD
LKELNREVSSLPVKHFDFSADDKNLVESTSPSCASNESKVHAYELNEQSDCRYTTHDSPP
KHNEKICDRDSLTKEKIHETKVTSSVPIVTEAKLNIFSPSDSITSDTVVHELRASTVQDF
KEGMTPLSSIRHKDWLDLSYWLPREICSIYKEKGITKLHPWQVECLNVDGVLQRRNLVYC
ASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICVEKAAHLDVLLEPLDKHVRSYYGN
QGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQTRGYLLELLL
TKLRYAGGEGNSDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTD
FRPVPLEEYIKVGNIIYNKSLDIVRTISKTANLGGKDPDHIVELCNEVVDEGHSVLIFCC
SRKGCESTAKHVSKFLKKFSVKLHNENSEFADISSAIDALRRCPAGLDPILEETFPSGVA
YHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY
KQMAGRAGRTGIDTKGESVLICRPEEIKRINELLNESCPPLQSCLSEDKNGMTHAILEVV
AGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNGDTKLYSTTPL
GRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMG
LSSLDQSVGNRVGVTEPFLMHMAHGAPVRRANLSRNGVKGLRTKRDEHGCMYGDRPSEEQ
TIRVCKRFYVALILSRLVQETPIPEVCEAFKVARGMVQALQESAGRFASMVSVFCERLGW
HDLEGLVAKFQNRVSFGVRAEIVELTSIPFVKGSRARAFYKAGLRTTLAIAEASDAEIVK
ALFESASWTAEESTAQKRMHVGIARKIKLGARKVVLDKAEEARIAAFSAFKSLGFIVPQI
SRPLSASAVGNIRAQVAAIVPSEIDTFNRVVSTTQMEHVSSKSCVGGTSSSEKIGGKNLS
ETGAISVEVKRPTFGVENTRMKVEGSAIQEANSVVDCAGKVDVAIANQVEKINDKDAERE
QCSIKVLHPPKRDGLSMKGPIHAVSTSGGFESFLDLWDATQEFYFDLYYTKRSEVNSVVP
FELHGIAICWENSPVYYLNLPKDLLWPKTGKGFYPDDSTPGDQLDVSQYEHWFEIVEKRW
KKINEIFVKENVRKFAWNLKVQIQVLKCPGVSIQKLGLLNSARRNMDHKLVDGSYLLLSS
VHISNGIDMCIVAWILWPDDERNSTPNLEKEVKKRLSSEAAAAANRSGQWKNQMRRVAHN
GCCRRAAQTRALCSVLWKLIISEELLKALNNIEIPLVSILADMETWGIGVDMEGCIRARN
LLGKKLRCLEKEAYRLAGMTFSLYAAADIANVLYGHLKLSIPERFNKGKQHPSTDKQCLD
LLRNEHPIVPVIKEHRTLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSM
EEPNLQCVEHAVDFKVNEDDVDHCKINARDFFVSTQENWLLLSADYSQIELRLMAHFSKD
PSLIELLSKPHGDVFTMIAARWTGKTEDSIGSHERDQTKRLVYGILYGMGAKSLALQLEC
SRDEAVGKIRSFKSSFPGVASWLHEAVAFCRQKGYVETLKGRRRFLSKINSPNSKEKSKA
QRQAVNSICQGSAADIIKVAMINLYSVIRPDAPDLTESPAANNNILRGHCRIVLQVHDEL
VLEVDPSVVKEAAALLQKSMENAASLLVPLQVKLKVGRTWGSLEPFLLDHFKIDDLVTGS
NT seq 6483 nt   +upstreamnt  +downstreamnt
atggcgtccggctctcctccttcgcgcatcgaccagttttatgcttcaaagaaaaggaat
cctcttactcccagtctgaagtcagggagttacgacaaggatggaaaaaggtcacttgaa
gggtcgcctggtaccaaaggtacgttggacaattacctggtgacctaccttggcaacgat
aacccatcacattcagttcgggaaaacttgtctgggcaagagctagtaaagcgaaaccta
ttgttgaaaattaatagctcctctagaaatgaacatgaggaacccactttgtctaaaggg
tttcacacttctgaagcaactgaaggaatcaagaaaagaacactggaagactcatacgag
accagaagttcagcagtcaaatctatggcaagtggctggggtgtcacgccgtgcatggag
aaaccagagcttaaacagtttgcagctgacttcttgtctctgtactgcagcagtgaacta
cagacgactgttagttcgccagtagagcaaaaagtaacttttaagaggcactccagtcca
tctctactagagggggaggctaaattaccgaagaagttgcatatgatggcgggtccatca
aatgccaaaggtgaaaccgattccttaagtgcattgagtgatggaaacaagcagtccaat
ttttttgtagaaaccggggatactgacaatcaccatcctgttgcgcttaaggcatgcctg
cagaaatgcaataaagcacctatatcaccttattgtttgactgaatgcagaacaccaggc
ttgtcgactgccaatgcatgttttcgtgagacgcccaagtctggaagctcgtcattttct
cctggagaagctttttggaaagaagcaattgtgtttgcagatggtttatgtgctcctagc
attgaccttaccagttacgatgctgaaggatctaatcctgcagagggccagagtaatacg
aagaaactcctaataccaggggaacccactcagaaaaggttaaaaggacagtttggtgga
ggtagtggtggagtccggcttggggaacctggtgcttccatagtttcactgaggagtgat
ttgaaagagttaaatagagaagtgtcttcacttcctgttaagcattttgacttctcggct
gatgataaaaacttggttgaaagtacatcaccttcttgtgcttcaaatgaatctaaagtt
catgcatatgaacttaatgagcagtctgattgtcgttatacaactcatgacagtccacca
aagcataatgaaaagatctgtgacagagattctcttacaaaagagaagatacatgaaacg
aaagtaacttcgtctgttccaatagtgactgaagcgaaattaaatatatttagtccctct
gatagtatcacatcagacacagtggttcatgaacttagggcttctactgttcaggatttt
aaagagggaatgacacctttaagttcaataagacataaagattggctggatctaagttac
tggctacctcgtgaaatttgcagcatttataaagagaaaggaatcacaaaactgcatcct
tggcaggttgaatgtcttaatgtagatggtgtcttacagagaagaaatcttgtttattgt
gcatctaccagtgctggaaaaagttttgttgctgagattttaatgttaaggcgggtaatt
tcaactggaaagatggcacttcttgtacttccatatgtatcaatttgtgtagaaaaggcc
gcgcatcttgatgttcttctcgaacctctggataagcatgtgcgtagttattatggaaat
caaggtggtggaacgcttcccaaggatacttctgtggctgtttgcacaattgagaaggca
aactctttgataaacagattgttggaagagggtcgtttgtcagaaattggaattattgtg
atagatgaattgcacatggttggggatcagacgaggggttatcttttggaactattgttg
acaaaacttcgttatgctggtggtgaaggtaattcagattctagcagtggggagagttct
gggacaagcagtggtaagtcagaccctgctcatggtattcaaatagttggcatgagtgca
accatgccaaacgtggcagctgttgcagattggcttcaggcagccttgtaccatactgat
tttcgacctgttcctctagaggagtacattaaagttgggaatatcatttataataaaagt
ttggacattgttagaacaatctcaaaaacagctaatcttggcggtaaggatccagatcac
attgtagaattatgtaatgaggtagttgacgagggtcactcagtattgatcttttgctgt
agtcggaaaggatgtgaatcaacagcaaaacatgtgtcaaaatttcttaagaagttttct
gtcaaacttcataatgagaacagtgagtttgcagacatttcttcggcaattgatgcgctg
cgaagatgtcctgctgggctggatcctatattagaggaaacctttccatctggcgttgcc
taccaccatgctggccttactgttgaggaaagggagattgttgaaacgtgctaccgcaag
ggtcttttgcgtgttttaactgctacatcaaccttagctgctggagttaacctgccagct
cgaagggtcattttccgacaacccaggattggacgagactttattgatggtacaaggtat
aagcagatggctggtcgggctggccggactggtattgataccaagggggaaagtgtactc
atctgcagaccagaagagattaagagaattaatgaacttcttaatgagagctgtccacca
ctgcaatcatgtttgtctgaagataagaatggaatgactcatgcaattttagaagtcgtg
gctggtgggattgttcaaactgctactgatattcaccgatatgtaaggtgtactcttctg
aattctacaaaaccatttcaagacgtggttaaatcagcacaggaatctcttcggtggtta
tgccatggaaaatttcttgaatggaacggagataccaagttgtatagtaccacgcctctt
ggacgtgcatcatttggaagctctcttagtccagaagaatcactaattgtgttggatgat
ctttcaagggccagagaaggatttgtgcttgcatctgatctgcatttggtgtatctagtc
acgccgatcaatgttgatgttgagccagattgggagttatattatgaacggtttatgggc
ctgtcttctcttgaccagtctgttgggaatcgagttggagttacagaaccatttttgatg
catatggcacatggtgcaccagttcgacgtgcaaacttatcacgaaatggtgtcaagggt
ttacgtacaaagcgtgatgaacatgggtgtatgtatggtgacagaccttcagaggagcaa
actattcgagtgtgtaaacgattttatgtggctctcatcttgtcaagacttgttcaggaa
acacccattcctgaagtttgtgaagcttttaaagttgccagagggatggttcaagcatta
caagagagtgccggaaggtttgcatctatggtctccgtattttgtgagagacttggatgg
catgatctggaaggtttggtagccaagttccaaaatcgtgtatcatttggagttagagca
gagattgtagaacttactagtattccatttgttaagggttctcgtgccagagcattctac
aaagctggtttgcggacaactttagcaattgcagaagcctctgatgctgaaatagttaaa
gctctctttgagtctgcatcatggactgcagaagagagtacagcacaaaaacggatgcat
gttggaatagcaaggaagattaagcttggtgctcgtaaagttgtcctggacaaagctgaa
gaggcaaggattgctgcattctcggcttttaaatcattggggtttattgtgccacaaatt
tctcgtcccttgtcagcaagtgcagttggaaatataagagctcaagtggctgcaattgtt
ccctctgaaattgatacttttaacagagttgttagcacaacacaaatggagcatgtttca
tctaagtcttgtgttggaggaacttccagttctgaaaaaataggtggaaagaacctgagt
gaaacaggagcaatttctgttgaagtaaaacggcccacttttggtgttgaaaatacaagg
atgaaggttgaagggtcagcaatccaggaggcaaacagtgttgttgactgtgcaggaaag
gtagatgttgcaatcgctaatcaagtggaaaaaattaatgataaagatgctgagagggaa
cagtgtagtattaaagttttgcatcctcccaaaagagacggtctttctatgaaaggtcct
atccatgcagttagtacatctggcggatttgaatctttcttggacttgtgggatgctacc
caagaattttattttgatctctattacaccaaacgatctgaagtgaactctgttgtcccc
tttgaattacatggaatagcaatctgttgggaaaattctccggtctattatttgaacctc
ccaaaggatttgttgtggcccaagactggaaaaggtttttatccggatgacagcacacct
ggtgaccagttagatgtttcgcaatatgaacattggtttgagattgtagaaaagagatgg
aaaaagatcaatgaaatttttgtgaaagagaatgtcagaaagtttgcatggaatttgaaa
gttcagattcaggtacttaaatgtccaggagtttccatccagaaattgggtttattgaat
tctgctcgacgtaatatggatcataaacttgtagacggttcatacctactgctgtccagt
gttcacatcagcaatggaattgatatgtgcattgtagcttggattctttggccagatgac
gagagaaattcaacccctaacctagagaaggaagtcaagaaaagattatctagtgaagct
gctgctgctgctaaccgaagtggccaatggaagaatcagatgagaagagtagcccataat
ggttgctgtcggcgtgctgcacagacacgagctctatgttcagttctctggaagttaata
atttctgaagagctcttgaaagctctcaacaatatagagattccattggtaagtattctt
gctgatatggaaacctggggtataggtgttgacatggagggatgcattcgggcccgtaat
ttactggggaaaaaactcaggtgccttgagaaggaagcttataggctagctggcatgacc
ttctccctgtacgcagcagcagatattgctaatgttctatatggacatttgaagctctct
attccagagaggttcaacaaaggcaaacaacatccaagtactgacaagcaatgtttggac
ttgctgaggaacgaacaccctattgttccagtcattaaagagcaccggacattggcgaag
ctttttaactgtactttgggatccatttgctcactagccaagctctctgcgaggacacag
aaatacacgctacatggacattggctccaaacatccacagcaactggtcggctttccatg
gaggagcctaatcttcagtgtgttgagcatgcggtagatttcaaagtgaatgaagatgat
gttgatcattgtaaaattaatgctcgtgattttttcgtctctactcaggaaaattggctg
ctcttatcggcagattattctcagatagagttgcggctgatggcacatttttcaaaagac
ccctcactgattgaacttctcagcaagcctcatggagatgtgtttaccatgattgctgct
agatggacagggaagacagaagactctattggatctcatgagcgagatcagaccaaaagg
ttggtatatggaatcctttatggaatgggcgccaaatcacttgcattacaactagaatgt
agtagagatgaggctgtggggaaaattcgaagtttcaaaagttctttccctggcgtggct
tcctggcttcatgaggcggttgcattttgccgtcagaaggggtatgttgaaactcttaaa
ggaagaaggcgcttcttgtcaaaaattaactctccaaatagcaaagaaaaatcaaaagca
cagagacaagctgtgaattcaatttgccagggttcagcggctgacataatcaaagtggcg
atgatcaacctttactccgtaatcagacctgacgctccagatcttacagagtcacctgca
gctaacaataatatattgaggggtcattgtcgaattgtattacaggtgcatgatgagtta
gtgctggaagtggacccttccgtcgttaaggaggcagcagctttgttacagaagagcatg
gaaaatgctgcctcccttctggttcctttgcaagtcaaactgaaagttggacgaacatgg
ggttctttggagccattcttgcttgatcacttcaagattgatgatcttgtaactggatct
tga

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