Clavibacter sepedonicus: CMS2571
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Entry
CMS2571 CDS
T00678
Name
(GenBank) beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CMS2571
Enzymes [BR:
cms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CMS2571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_42C
Glyco_hydro_35
Glyco_hydro_14
Glyco_hydro_2_C
DUF4350
DUF3459
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
CAQ02652
UniProt:
B0RI81
LinkDB
All DBs
Position
complement(2715590..2717611)
Genome browser
AA seq
673 aa
AA seq
DB search
MDPDRRDSPRPLTWPRGTEALRYGGDYNPEQWPRETWHEDVRLMREAGVNLVSIGIFSWS
VLEPSEGVYDFALLDEVMDLLHANGIDVDLGTPTAAPPAWFWARYPDSRPVTRSGTALGF
GSRGMVSPSSPEYRRAATEIARRLAERYRDHPSLVMWHVHNEYGAPISDCYSDHSVRAFR
AWLEARYGSLDELNRAWGTSFWGQRYGTWDEIDAPRQSASTTNQTQRLDFARFTSDALLA
CFTAERDAIREHTPHLPITTNFMASSCPSIDYWRWSREVDVVANDHYLTAERRDSHVMLA
LDADLTRSFAGNRPWMLMEHSTSAVNWQPRNIAKRPGEMARNSLAHVARGSDAVMFFQFR
ASRFGAEKFHSAMLPHGGTDTRIWREVVALGADVAALAPVRGSRVRARVAILWDIQSSWA
QDLEWRPSVELDHRERVEAFYTALWHRGVTVDFAHPHHDLSGYDVVLAPAQYLLDEEGSR
NLRDFVAGGGRLVVSYFSGIVDQDDAVHEGMAPGALRDVLGLGVQEFIPLRADETVALDS
GATGTGWADDIVLCGAEALVRYASGPAADGPAITRNAVGSGAAWYVSTRLDPAALDALLA
DVLAQAGIDAEPAPDGLERVTRHGDGEAFTFLVNHADDPRTVAIRGAELLTGTEADGALE
VPAGAVRVVRTAG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggatccggatcgccgcgacagcccgcgcccgctcacctggccgcgcggcaccgaagcc
ctgcgatacggcggtgactacaacccggagcagtggccccgcgagacgtggcacgaggac
gtccggctgatgcgcgaggctggcgtgaacctcgtgagcatcggcatcttctcgtggtcc
gtgctggagccgagcgaaggcgtgtacgacttcgcgctgctcgacgaggtcatggacctc
ctccacgccaacgggatcgacgtcgacctgggcacgcccaccgccgctccgcccgcctgg
ttctgggcgcgctaccccgactcgcgtcccgtcacgcgctccggcacggcgctcggcttc
ggatcccgcggcatggtcagcccttcgagccccgagtaccgcagggcggcgacggagatc
gcccgccggctcgccgagcgctaccgggaccacccctctctcgtgatgtggcacgtgcac
aacgagtacggcgcgcccatcagcgactgctactccgaccactcggtgcgcgccttccgt
gcctggctcgaggcccgatacggctcgctggatgaactcaaccgcgcgtggggcacgtcg
ttctggggtcagcgatacgggacgtgggacgagatcgacgccccccggcagtcggcgagc
accacgaatcagacgcagcggctcgacttcgcgcgcttcacgtcggatgcgctcctcgcc
tgtttcaccgccgagcgtgacgcgatccgggagcacacgccccatctgccgatcaccacg
aacttcatggcatcgagctgcccgtccatcgactactggcggtggagccgggaggtcgac
gtcgtcgcgaacgaccactacctcacggccgagcgccgggacagccacgtgatgctcgcg
ctcgacgccgacctcacgcgctccttcgcgggcaaccggccgtggatgctcatggagcac
tccacatccgccgtgaactggcagccgcgcaacatcgcgaagcggcccggggagatggcg
cgcaacagcctcgcccacgtggcgcgcggatccgacgccgtcatgttcttccagttccgc
gcctcccgcttcggcgcggagaagttccactcggcgatgctgccgcacggtggcacggac
acgcggatctggcgcgaggtcgtggcgctcggcgcggacgtggccgcgctcgcgcccgtg
cgcggatcccgcgtccgcgcccgcgtcgcgatcctctgggacatccagtcgtcctgggcg
caggatctcgagtggcgcccgtcggtggagctcgaccaccgcgagcgcgtcgaggccttc
tacacggcgctctggcaccggggtgtgacggtcgacttcgcgcatccgcaccacgacctg
tcgggctacgacgtggtgctcgcacccgcccagtacctgctcgacgaggaggggtcgcgg
aacctcagggacttcgtcgcgggcggcgggcggctcgtggtgtcgtacttcagcggcatc
gtggatcaggacgacgccgtgcacgaggggatggcgcccggcgcgctccgcgacgtgctg
gggctcggcgtgcaggagttcattccgctgcgcgccgacgagaccgtggcgctcgactcc
ggcgcgacgggaaccggctgggccgacgacatcgtgctgtgcggcgccgaggcgctcgtg
cgctacgcgtcgggaccggcagcagatggacccgcgatcacacggaatgccgtcggatcc
ggcgccgcctggtacgtctcgacgcgcctcgacccggcggcgctcgacgcgctgctcgcc
gacgtgctggcccaggcgggcatcgacgcggagccggccccggacggcctggagcgcgtg
acgcggcacggcgatggcgaggcgttcaccttcctcgtcaaccacgccgacgatccgcgg
acggtggcgatccgcggcgccgagctgctcaccgggaccgaggcggacggggcgctcgag
gtgccggcaggcgcggtgcgggtggtgcgcacggccggatga
DBGET
integrated database retrieval system
