Clavibacter sepedonicus: pCSL0052
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Entry
pCSL0052 CDS
T00678
Symbol
SLP2.27
Name
(GenBank) putative DNA modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00270
Cysteine and methionine metabolism
cms01100
Metabolic pathways
Module
cms_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
pCSL0052 (SLP2.27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cms03000
]
pCSL0052 (SLP2.27)
03032 DNA replication proteins [BR:
cms03032
]
pCSL0052 (SLP2.27)
03036 Chromosome and associated proteins [BR:
cms03036
]
pCSL0052 (SLP2.27)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cms02048
]
pCSL0052 (SLP2.27)
Enzymes [BR:
cms01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
pCSL0052 (SLP2.27)
Transcription factors [BR:
cms03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
pCSL0052 (SLP2.27)
DNA replication proteins [BR:
cms03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
pCSL0052 (SLP2.27)
Chromosome and associated proteins [BR:
cms03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
pCSL0052 (SLP2.27)
Prokaryotic defense system [BR:
cms02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
pCSL0052 (SLP2.27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CAQ03295
UniProt:
B0RJA5
LinkDB
All DBs
Position
pCSL1:complement(34700..36334)
Genome browser
AA seq
544 aa
AA seq
DB search
MRMAANHWKLAIETHNTNHPDTDHDIADLSQVDPRRYPRTKILWGSPECTSHSQAAGIKR
GSTQGEFDLYDDRPLPSEAAERSRATMWDIPRFAEYHRYEAVIVENVVDAAKWIQFPAWL
MSMELLGYDHETVWLNSMHAQALGAPAPQSRDRMYVVFWRRGNRRPDLAKWTRPRAFCPE
HGIVRAEQVFKKRERWGRYRAQYVYQCPKVSCRGRVLEPGWLPASSIIDWSIPGQRIGDR
LRPLAPKTRERIRRGIEKHWAPVVVEAAGNAYDSTDPKHRQHSNPDGYVRAWPSTDVLKT
LHTTASKALVVNHLYGADERRSRPVEDPLPTLVASTVNASLLVPVEGRDGKHAAPVSGPL
RTQSTRNETGLVVPLRTHGTAASTAEALKTVVAGTVSQALVVPLRNHGVTKPAQQPIDTV
AAGGNHHALVMRNNTARGDSSQMSTPVHEPMRTQTASGTQSLLQPGARISVDVDDCEFRM
LTPEEIKRGMAFTAEYLLLGTKREQVRLAGNAVTPPAARDLIAAVAESLGVDVGPISMDS
LEVA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatggcggcgaaccactggaagctcgcgatcgagacccacaacacgaaccacccc
gacaccgaccacgacatcgcggacctgtcccaggtcgacccgcgccgctacccgcgcacg
aagatcctgtggggatcccccgagtgcacctcgcactcgcaggccgcgggcatcaagcgg
gggagcacgcagggggagttcgacctctacgacgaccgcccgctgccatccgaggcagcc
gagcggtcccgggccaccatgtgggacatcccgcggttcgccgagtaccaccggtacgag
gcggtgatcgtggagaacgtcgtcgacgcggcgaagtggattcagttcccggcctggctg
atgtcgatggagctcctcggctacgaccacgagaccgtgtggctcaactcgatgcacgcc
caagcgctcggtgcgccggcgccacagtcacgggaccggatgtacgtcgtgttctggcgc
cgcgggaaccggcgtcccgatctggcgaagtggacgcggccgcgggcgttctgccctgag
cacggcatcgtccgcgccgagcaggtcttcaagaagcgcgagcggtggggccgctaccgg
gcgcagtacgtctaccagtgccccaaggtctcctgccgcggtcgtgtgctcgagccgggg
tggctgccggcgtcctcaatcatcgactggtccatccctggccagcgcatcggcgatcgc
ctccgcccgctcgcgccgaagacgcgcgagcggatccgccgcggcatcgagaagcactgg
gcgcccgtcgtggtcgaggctgccggcaacgcctacgactccaccgaccccaagcaccgc
cagcacagcaaccccgacgggtacgtgcgcgcctggccgagcaccgacgtcctcaagacc
ctgcacaccaccgcgtccaaggcgctcgtcgtgaaccacctctacggcgccgacgagcgc
cgctcacggcccgtcgaggacccgctgcccaccctggtcgcctccacggtgaacgcgtcg
ctcctggtcccggtcgagggccgggacgggaagcacgcggcgccggtgtccgggccgctg
cgcacgcagtccacccgcaacgagaccggcctcgtcgtcccgctgcgcacccacggcacc
gcggcgtcgaccgctgaggcgttgaagaccgtcgtcgccggcaccgtctcccaggcactc
gtcgtcccgctgcggaaccacggcgtcaccaagccggcccagcagcccatcgacaccgtc
gccgccggcgggaaccaccacgcgctcgtgatgcggaacaacaccgcccgcggagacagc
agccagatgtccaccccggtccacgagccgatgcgcacgcagaccgccagcggcacccag
tcgctcctgcagccgggcgcgcggatctcggtcgacgttgacgactgcgagttccgcatg
ctcacccccgaggagatcaagcgcggcatggcgttcactgccgagtacctcctcctcggc
accaagcgcgagcaggtccgcctcgccgggaacgccgtcactccaccggccgcacgggac
ctcatcgcggccgtcgccgagtccctcggcgtcgacgtcggcccgatcagcatggacagc
ttggaggtggcctga
DBGET
integrated database retrieval system
