Cronobacter muytjensii: AFK63_18970
Help
Entry
AFK63_18970 CDS
T04067
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw00540
Lipopolysaccharide biosynthesis
cmw01100
Metabolic pathways
cmw01250
Biosynthesis of nucleotide sugars
Module
cmw_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AFK63_18970 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cmw01005
]
AFK63_18970 (rfaD)
Enzymes [BR:
cmw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AFK63_18970 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cmw01005
]
Core region
AFK63_18970 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ALB72569
LinkDB
All DBs
Position
complement(4141073..4142005)
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDIGYTDILVVDNLKDGTKFVNLVDLNIADYMDKEDFQVQI
MSGEEFGDVEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQITGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDNFKRDFIYVGDVAAVNLWFWQNGVSGIYNCGTGRA
ESFQAVADAALAFHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgctggttttatcggcagcaacattgttaaggctctgaac
gacatcggctataccgatattctggtggtggataaccttaaagacggcaccaagtttgtt
aacctggtggatctgaacatcgccgactacatggataaagaagatttccaggtgcagatc
atgtccggggaagagttcggcgacgtcgaagccgtattccacgaaggcgcatgctcgtcc
actaccgagtgggatggcaagtacatgatggataacaactatcagtactccaaagagctg
ctgcactactgcctggagcgcgaaatcccgttcctgtacgcctcttccgccgccacctac
ggcgggcgcacctctgatttcatcgaatcccgtgaatatgaaaagccgctgaacgtttac
ggctactctaaattcctgttcgacgagtatgtccgccagatcctgccggaagcgaactcc
cagattaccggctttcgctacttcaacgtctacgggccgcgcgaaggccacaaaggcagc
atggcgagcgtcgcgttccatctcaacacccagctgaacaacggcgagagcccgaaactg
tttgaaggcagcgataatttcaagcgcgacttcatctatgtgggcgacgtggcggcagta
aacctgtggttctggcagaacggcgtctccggcatttataactgcggcactggccgtgcg
gagtcgttccaggccgtggcagatgccgcgctggccttccataaaaaaggcagcattgag
tacatcccgttcccggaaaaactcaaaggccgttatcaggcgtttacgcaggcggatctt
accaacctgcgcgcggcgggttatgacaagccgtttaaaaccgttgctgaaggtgtgacg
gaatacatggcctggctgaaccgcgacgcataa
DBGET
integrated database retrieval system
