Chelonia mydas (green sea turtle): 102939529
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Entry
102939529 CDS
T02989
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04020
Calcium signaling pathway
cmy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102939529 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102939529 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102939529 (GRIN2C)
Ion channels [BR:
cmy04040
]
Ligand-gated channels
Glutamate (ionotropic)
102939529 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
102939529
NCBI-ProteinID:
XP_037770923
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All DBs
Position
14:complement(14134837..14182606)
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AA seq
1386 aa
AA seq
DB search
MGRALTHTLVLSMVLGCSAVILDLLLPGPGEPVVNVAVVFGGSSYPLHVRSRLTHQSFLD
LPLEIHPVTVIVNDTNPSTLLTQICNILASIKIHGIVFEDNIGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPDSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FVDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQIDAQVMIVYCSREEAVYLF
QVAEQAGLVGPGYIWIVPSLTVGNMEIPPASFPVGLISVVTESWKMSLRQKVRDGMAIIA
TGAESYFRTHGYLPDVGKDCKTPPTTTANRTFYRHLLNVTWEHRDFSFNEAGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVSDNRHLTVATLEERPFVIVENT
DPASGVCVRNTVPCRKQTNYTDSGDGPVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGIWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFSGVQNLESPVRVRTPDVTANSAQANVLKMLQ
AAKDMVSTASVGSSLENATRTIENWTNRSENLQTTFSLRTPQLVVQNTSVSNRPPYSSNV
AATEKLGRDCAQRAVPPPIPAPQQPFVDSRLPANENWRAVNEQPPILHPLKFRGSYSGDK
VLPGSTVGGFPHLLVRTMPPSHFGSHVPLGNHLSTPLPPLKTQRELPLPDIYKEHKHPVS
RGEGKEKLPPNVHLVYGEGGHGDPAQLAKLFSTSEKSPFLPPDCMNGSFSKADRPCRRLV
TVFKEPEPVELPFLGKEKLNRRASLLRSAWEQNEKYRSLGIRRYDGKSSTRGDVPDLFPK
AGVALRQTPMYYPMEALRSSAMCNRKRVEANSRLPWKAQRFLHSQAARLPSYGEACLQNA
TGMHRASSTVVHKQYAYMNSYMNLPMYLGRLYQGPPPLCEHSRTSQRCVTRAPWAPRSRD
YLVQEDSRRTMYFDSVYRDCTERSRAEPSFLQMVNTERRDLLAAQRMNNPCAAQSWRRIS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagctctgacgcacactctggtactgtccatggtgctgggctgttcagctgtc
atactggatctcctgctgccgggccctggggagccagtggtaaatgtggccgtggtgttt
gggggctcctcataccctctccacgtccgcagccggctgactcaccagagcttcctggat
ctgcctctggagatccacccggtcacggtgattgtgaatgacaccaaccccagcaccctc
ctgacccagatctgcaacatcctcgccagcatcaagatccacggcatcgtctttgaggac
aacatcggcacagaggctgtggcacagattctggacttcatatcctcccagacccaggtc
cccatcatcagtatcagtgggggctctgccgtggtcctgacccccaaggagcctgactct
gccttcctgcagctgggagtctccatcgagcagcagatccaggtgatcttcaaagtcctg
gaggaatatgactggggctcctttgcggtcatcaccagcctgtacccagggtacaacatc
ttcgtggacgttatccgttccttcacggacgccagctactttggttgggaactccaggac
gtcctgacctttgagatgacccaggatgggagcaactccaaaacccagcggctgctacgg
cagattgatgcccaggtgatgattgtgtactgctcgcgggaggaggctgtgtacctcttc
caggtggcggagcaggcgggcttggttgggcccggctacatctggattgtgccaagcctg
acggtggggaacatggagatcccacctgcctctttccccgtcggcctcatcagcgtggtg
actgagagctggaagatgagcctgaggcagaaggttcgggatggcatggccatcatcgcc
acgggggctgagagctacttcaggacccacgggtacctcccagacgtgggcaaggactgt
aagacgccgcctaccaccactgccaacagaactttctacaggcacctgctgaatgtgacg
tgggagcacagggacttctccttcaatgaagctggttacttggtgaggccaaccatggtg
gtgatctcactgaaccggcatcggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtacccagtgtggcctcgctatggctccttcctgcagcccgtgtcggac
aatcgccacctcaccgtggccaccctcgaagagaggccctttgtgattgtggagaacacg
gacccggcctctggcgtctgtgtgcgcaacaccgtcccctgccggaagcaaaccaactac
accgacagtggggatggacctgtggacccctacaccaaactctgctgcaagggcttctgc
atcgacatcctgaagaagctggccaaggcagtgaagttctcctatgatctctacctggta
accaatggaaaacatgggaagatagtgcgtggcatctggaatggcatgattggcgaggtg
tactatcagcgagcggacatggccatagggtccctcaccatcaacgaggagcggtctgag
attgtggacttctctgtgcccttcgtggagacgggcattagtgtcatggtggctagaagc
aatgggaccgtctcgccttctgccttcctagagccctacagcccggcggtgtgggtgatg
atgttcgtgatgtgtctcactgtggttgccatcactgtcttcatgtttgaatatttcagc
cctgtcggctacaaccagaatctaaccagcggaaaaaagtccggcgggccctccttcacc
attggcaaatctgtctggctgctgtgggccctggtctttaataactcggtgcccatagag
aatccaaaaggcaccacaagtaagatcatggtgctgatctgggccttcttcgcagtgatc
ttcctggccagttacacagctaacctggcagcctttatgatccaggagcaatatatcgac
accgtctctgggctgagtgacaagaagttccagaggccccaggagcagtatcccccgttc
cgcttcggcaccgttcccaatggcagcacggagagaaacattcggagcaactatccagat
atgcacacgcacatggtgaaatacaaccagcgctcggtggaagacgccctgaccagcctc
aaaatggggaagctggatgcctttatctatgatgccgctgtgctgaattacatggctggc
aaggacgagggctgcaagctggtgaccatcggcagtgggaaggtctttgctaccaccggc
tatggcattgctctgcagaaggattccaagtggaagaggccgattgacttggcccttctg
cagttcctgggagatggggaaacccagaaactggagaccgtgtggctgtcggggatctgc
cagaatgagaagaatgaggtgatgagcagcaagctagacattgacaacatggccggggtc
ttctacatgctgttggtggccatggggttgagcctgctggtctttgcctgggagcacctg
gtgtattggaaactacgccactctgtccccaagtcgcacaaacttgacttccttctggcc
ataagcaggggcatttatagctgtttcagtggagtccagaatctggagagccctgttcgt
gttcgcactcccgacgtcaccgctaactctgcccaagccaatgtgctgaagatgctgcag
gctgccaaggacatggtgtcaacagccagtgttgggagctcccttgagaatgccacgcgc
accatcgagaactggacaaaccggagtgaaaacctccagaccacgttctcccttagaact
cctcagcttgttgtccagaacaccagtgtgtccaacaggccaccctactcctccaatgtg
gccgcaacagagaagcttgggagggactgtgcccagagggctgttccaccacccatccct
gctccccaacagccctttgtggattccaggctgccagctaatgaaaactggagggcggta
aatgagcaacctccaatacttcaccccctaaagtttagaggaagctattctggggataaa
gttcttccaggttccaccgtgggtggctttccgcacctcctggtgaggaccatgcctcca
tcccattttgggagccacgtgcccctgggaaaccacctgagcactcccctcccaccactg
aaaactcaaagggagcttcccctcccagacatctacaaagagcacaagcaccctgtgtcc
aggggagagggaaaggagaagcttccaccaaatgtccacctggtatatggggaaggagga
cacggggacccagcccagctggcaaagctgttctccacttccgagaagagccctttcttg
cctcccgactgcatgaacggctccttctcaaaagccgacaggccttgcagacgcttagtt
actgtgttcaaggaaccagaaccagtggagctaccttttctgggcaaggaaaagctgaac
agaagagccagcctgctgaggtctgcctgggagcagaacgagaagtaccgttccctaggc
atccggagatacgacggcaagtcttccacccgaggggatgtgccagatctcttccccaaa
gctggtgtggcactgaggcagacaccaatgtactatcccatggaagccctcaggtccagt
gctatgtgcaacagaaaacgtgtggaggcaaactccagactcccttggaaagcccagcgg
ttcctgcactctcaggcggcgaggctgccctcttacggggaggcgtgcctgcagaacgcc
actggcatgcaccgggcctcctccaccgtggtgcacaaacagtacgcctacatgaactcc
tatatgaacctgcccatgtatttggggcggctttaccaggggcctcccccgctctgcgaa
cactccaggaccagccagcgctgtgtcactcgggccccctgggcacccaggagcagggac
tacttggtccaggaggacagccggaggaccatgtactttgacagcgtgtacagagactgt
acagagcgaagcagagcagagccgtccttcctccagatggtcaatacggagaggagggac
ctcctggcagcccagagaatgaacaatccttgtgctgcccagtcctggagacgaatctct
agccttgagtccgaggtgtga
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