Chelonia mydas (green sea turtle): 102941294
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Entry
102941294 CDS
T02989
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102941294 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmy02000
]
102941294 (ABCB1)
04147 Exosome [BR:
cmy04147
]
102941294 (ABCB1)
04090 CD molecules [BR:
cmy04090
]
102941294 (ABCB1)
Enzymes [BR:
cmy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
102941294 (ABCB1)
Transporters [BR:
cmy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
102941294 (ABCB1)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102941294 (ABCB1)
CD molecules [BR:
cmy04090
]
Proteins
102941294 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
Rad17
AAA_5
AAA_15
AAA_29
AAA_30
AAA_28
SbcC_Walker_B
DUF87
AAA_7
DUF815
G-alpha
AAA_24
AAA_21
AAA_14
nSTAND1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
102941294
NCBI-ProteinID:
XP_007069661
LinkDB
All DBs
Position
2:220618538..220704064
Genome browser
AA seq
1279 aa
AA seq
DB search
MNNSHEIKMGTENERTSDVNGRAGNAAVPDQDCESKSKCNEDKKQPKKPNVVSPLTMFRY
ADWLDKLLMVLGSALAILHGAALPVMMIIFGDMTDSFVIPRNLSSGNISFNPYEKLEEQM
SRYAYYYSGIGAGVLFAAYIQIAFWTLAAGRQIKKIRQQFFHSIMRQEIGWFDVNDVGEL
NTRLIDDVSKINEGIGDKIGMLFQSIATFLTGFIVGFIKGWKLTLVILAVSPVLGLSAAL
WAKILSAFTDKELTAYAKAGAVAEEVLAAIRTVIAFGGQKKEIKRYNKNLEDAKNIGIKK
AITANVSMGIAFLLIYASYALAFWYGTTLVLSDDYSIGKVLTVFFAILIGAFSVGQTAPG
MEAFANARGAAYAIFNIIDNEPQIDSFSETGYKPDHIQGNLEFHNVYFNYPSRQDVKVLK
GLNLKVNCGQTVALVGSSGCGKSTTVQLIQRFYDPEKGMITIDGHDIKTLNLRYLREIIG
VVNQEPVLFATTIAENIRYGREDVTMEEIKKAVKEANAYDFIMKLPDKFETIVGERGAQL
SGGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQTALDKAREGRTTIVIAHRLST
VRNADLIAAFEDGVITEQGTHHELMKTNGIYCKLVNMQTIGTEVQSEEAGTTTEVALKES
IGNGLRRRLTRKSTKKSEIQDDSLDVKIVQPDENVPPVSFLKVMKLNKSEWPYFVVGTFS
AIINGALQPAFAIIFSEIIGVFAEPDKTVLRNKSNLYSLLFLAIGIISFVTFFLQGFTFG
KAGEILTMRLRFMAFKAMLRQDISWFDDPKNSTGALTTRLANDASQVKGATGARLALITQ
NIANLGTGIVISFVYGWQLTLLILAIVPIIAIAGIIQMKIFSGHAKKDKEELEAAGKIAT
EAIENIRTVVTLTQERKFEFMYGQNLQGPYRNSVKKAHIFGLSFGLTQAIIYFTYAGCFR
FGAYLVGNGDMEFKSVFLVFSAIVFGAMTLGQTSSFTPDYAKAKLSAAHLFTLFERAPLI
DSYSDEGLKPDIFGGNVAFKEVTFNYPTRPDVQVLQGLNIKVEKGQTLALVGSSGCGKST
VIQLLERFYDPLGGEMLLDGQNAKSLNIQWLRAHIGIVSQEPILFDCSIAENIAYGDNSR
EVSSEEIVNAARAANIHSFIDSLPNKYNTCVGDKGTQLSGGQKQRIAIARALVRHPQILL
LDEATSALDTESEKVVQEALDKARQGRTCIVIAHRLSTVQNADKIAVIQNGKVVEQGTHQ
QLLAERGIYYSLVNVQAGP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattctcatgagattaaaatggggactgaaaacgaaagaacgtctgatgtgaat
ggaagagctggtaatgctgctgtaccagaccaggactgtgaatccaaaagcaaatgcaat
gaggacaagaagcagccaaagaaacctaatgtggtcagcccattaacaatgtttcggtac
gctgattggctggataaattactaatggtgctaggctctgcccttgcaatccttcatgga
gcagctctcccagtcatgatgataatctttggagatatgacagatagttttgttattcca
cgaaatctgtcttcagggaatatttcctttaatccttatgagaaacttgaggaacaaatg
tccagatatgcatactattattctggaataggagctggtgttctatttgcagcctacata
caaattgcattttggacactggcagctggacggcaaattaagaaaatcagacaacaattt
ttccactcaataatgcgacaggaaattgggtggtttgatgtgaatgatgttggggaactc
aacactcgacttatagatgatgtctccaaaattaatgaaggaattggtgacaaaattgga
atgctctttcagtcaatagctacatttctcacaggatttatagttggtttcataaaagga
tggaaattaacccttgtaatactggcagtcagtcctgtcctgggactctcagctgctctc
tgggcaaagatactctctgcattcactgacaaagaactaactgcatatgcaaaagcagga
gctgttgcagaagaagttctggcagcaattcggactgtgatagcttttggaggacagaaa
aaagaaatcaaaaggtataataagaatttagaagatgccaaaaacattggaatcaagaag
gctattacagccaacgtttctatgggtattgctttcttactgatatatgcatcatatgca
ttggcattttggtatggaaccactttggtgctatctgatgattatagtattggaaaagtc
cttacggtcttttttgctatattaattggagcatttagtgttggacagaccgcaccaggt
atggaggcatttgctaatgcaaggggagctgcctatgcaatctttaatatcatagacaat
gaacctcaaattgacagtttttcagagactggctacaaaccggaccacattcaagggaat
ttggaattccacaatgtttacttcaattatccatctaggcaagatgtaaaggtattgaaa
ggcttgaatctgaaggttaattgtggccagacagtagccttggttggtagcagtggctgt
ggcaaaagtacaactgttcaactgatccagagattttatgatccagagaagggcatgatt
actattgatgggcatgatattaagaccctaaatttaagatatctgagggagattattggt
gtggtgaatcaggagcctgtgctattcgctactactattgcagaaaacatccgctatggc
cgtgaagatgtcactatggaagagattaaaaaagctgtcaaggaagccaatgcctatgac
tttatcatgaaactgcctgataagtttgaaaccatagttggagaaagaggggcacaactg
agtggaggtcagaaacagagaatagctattgcacgagctctggttcgcaatcccaagatt
cttctgcttgatgaggcaacttcagctttggacactgaaagtgaatcagttgtgcaaaca
gcactggacaaggctagagaaggccgcaccaccattgtaatagctcatcgcttgtctaca
gtccgaaatgcagatcttatagctgcatttgaagatggagtcatcacagaacaagggacc
catcatgaactgatgaaaacaaacggaatttactgcaaacttgtaaacatgcagacaata
ggaactgaagttcagtcagaagaagctggaaccaccaccgaagtagcactgaaagaatca
ataggaaatggcttgagaaggagattgactcgaaaaagcaccaaaaagtcagaaatacag
gatgatagccttgatgtgaaaattgttcaacctgatgaaaatgtgcctccagtttcattt
ctgaaagttatgaagctgaacaaaagtgaatggccttactttgtagttggaactttttct
gcaattatcaatggagctttacaacctgcatttgcaataatattttcagaaattataggg
gtttttgcagaaccagacaagaccgttttaagaaacaagagcaacttgtattcactgcta
tttttagcaattgggatcatttcttttgttactttttttctgcagggtttcacgtttggc
aaagctggagagatccttacaatgaggcttcgattcatggcatttaaagcaatgcttaga
caggacatcagctggtttgatgaccctaaaaacagcactggggcattaactacaagactt
gctaatgatgcctcacaagtgaaaggagctacaggtgccagactggctttaattacccaa
aacatagctaaccttggaactggaattgttatatcattcgtctatggctggcagctgacc
cttttgattttagccattgtgccaatcattgccatagcaggaatcattcaaatgaaaata
ttttctggacatgcaaaaaaggataaagaagaactggaagctgcaggaaagattgctact
gaagccatagaaaatattcgaactgttgttactttgacccaggaaagaaaatttgaattt
atgtatggacaaaatttgcaaggaccatatagaaattctgtgaagaaggcacatatcttt
ggacttagttttggccttacacaagcaattatatattttacttatgctggatgttttcgg
tttggtgcctatctagtgggaaatggagacatggagtttaaaagtgtgtttttggtattt
tcagctattgtatttggtgcaatgacactaggacagaccagttcatttactccagactat
gccaaagccaagttgtcagcagcacacttgttcacgctgtttgaaagagcccccttaata
gacagttacagtgatgaaggactgaagcctgatatattcggaggcaacgtagcattcaaa
gaagtgacatttaactacccaactcgaccagatgtccaagtgcttcaaggcttgaatatt
aaggtagaaaagggacagaccctggcgctcgtaggcagcagcggctgtggaaagagtact
gttattcagttgcttgagaggttctatgatcctcttggtggagaaatgctgctggatggc
caaaatgcaaaatcattaaatatccaatggcttagagctcacattggtattgtctcacaa
gaaccgatcctgtttgactgcagtattgctgagaatattgcatatggagataacagtaga
gaggtgtcatctgaagagattgtaaatgcagcaagagcagccaacatacattccttcatt
gactctctgccaaataaatataatacctgtgtgggagacaaaggaactcagctctcgggt
ggtcagaagcagcgtattgctattgctcgggctcttgtacgtcatcctcaaattctgcta
ctggatgaagccacatctgctctagatacagaaagtgaaaaggttgtccaagaagcactg
gataaagcaagacaaggtcgcacctgtattgtaatagctcatcgcctgtccaccgtgcag
aatgctgacaagatagcagtaatccagaatggaaaggtcgttgaacaaggaacacatcag
caactcttggctgaaaggggcatctactattctctagttaatgttcaagctggaccatga
DBGET
integrated database retrieval system
