Chelonia mydas (green sea turtle): 102942167
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Entry
102942167 CDS
T02989
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00310
Lysine degradation
cmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102942167 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102942167 (PRDM6)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102942167 (PRDM6)
Enzymes [BR:
cmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
102942167 (PRDM6)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102942167 (PRDM6)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102942167 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
102942167
NCBI-ProteinID:
XP_007060930
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All DBs
Position
5:76334459..76433857
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AA seq
568 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALTQLPPPPERADPSADSLRQRP
ASLSSASSSSSSSTPSSSTSSCASAAASLAGLTSISVAQIPAFGPLPSSEAPSGAPASLQ
SKDLCGGGAKCSERAAPRFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRN
GECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQR
IQQGTWIGPFQGVVLLPEKVQTGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIR
CARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNV
PSTVMEAMSRPDTLQPFNKSSKLPPATPQRSIVFPQTPCSRNFSLLDKSGPIESGFNQIS
VKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCS
QSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFT
QATQLSRHQRMPNECKPITESTESIEVD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcccggcgacccaggcggatctgctttcctgaaggtggatcccgcctatctc
cagcactggcagcagctgttcccgcagagcagccagctcaagagcagcggggccctcacc
cagctcccgccgccgcccgagagagcggatccctcggctgacagcctccgccagcgccca
gcctctctctcctccgcttcctcttcttcctcttcgtccaccccatcttcttccacctcc
tcgtgcgcctccgccgccgcttccctggccgggctgacctcgatctctgtggcccagatt
cccgcctttgggccgcttccgagctccgaggccccctccggagccccggcctccctgcag
agcaaagacttgtgcggcgggggcgccaagtgcagcgagcgggctgcgcccaggtttcga
tgtacggcagaggagctggactattacctgtatggacagcaacgcatggagatcatcccc
ctgaaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgctgataaccgcaat
ggtgagtgccccatgcatgggccacttcactctctgcgccgcctagtgggcactagtagt
gctgcagccgcagcacctccacctgagatccctgaatggctcagggacctcccccgggaa
gtgtgtctgtgtaccagtactgtacctggtctggcctatggcatctgcgctgcgcagagg
atccagcaaggcacctggattgggcctttccagggagttgtccttctgccagagaaggtt
caaacgggagccatcaggaacacgcagcacctctgggaaatatatgaccaagatgggaca
ctacagcactttattgatggcggggaacccagtaagtcaagttggatgaggtatatccga
tgtgcaaggcactgtggggaacagaatctaacagtagttcagtacaggtcaaatatattc
tacagggcctgtatagatatccccagaggcactgaactgctggtgtggtacaatgacagc
tacacatctttctttggaatccctttacagtgtattgcacaggatgaaaatttgaatgtc
ccttcgactgtaatggaggccatgtccagaccagacactctacagccatttaacaaaagt
agcaaactaccccctgccactccacagcgatccatagtatttccacagactccgtgtagc
agaaatttttctcttctggataagtctgggcccatcgagtcaggatttaaccagatcagt
gtcaaaaaccaacgagttcttgcaagcccaacatcaacgagccaactaaattctgagttc
agtgactggcacctttggaaatgtgggcaatgctttaagactttcacccagcggatcctc
ttacagatgcatgtgtgtacacagaatcctgacagaccctatcagtgtggccactgctcc
cagtctttctcccaaccttcggaactaaggaaccatgtagtcacccattccagtgataga
cctttcaagtgcggctattgcggtcgtgcctttgctggtgctacaacactcaacaatcat
atccggacgcatacgggggaaaaaccctttaagtgcgagaggtgtgagaggagcttcaca
caagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagaa
agcacagaatcaattgaagtggattaa
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integrated database retrieval system