Croceicoccus naphthovorans: AB433_15275
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Entry
AB433_15275 CDS
T03964
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna03030
DNA replication
cna03410
Base excision repair
cna03420
Nucleotide excision repair
cna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB433_15275
03410 Base excision repair
AB433_15275
03420 Nucleotide excision repair
AB433_15275
03440 Homologous recombination
AB433_15275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cna03032
]
AB433_15275
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_15275
Enzymes [BR:
cna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB433_15275
DNA replication proteins [BR:
cna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB433_15275
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB433_15275
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB433_15275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DprA_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AKM11021
UniProt:
A0A0G3XKA4
LinkDB
All DBs
Position
complement(3090186..3093044)
Genome browser
AA seq
952 aa
AA seq
DB search
MSDAETPSRKPHLYLVDGSAYIFRAYHRLPPLTDPEGTPVGAVYGYTTMLWKLAQDLDDA
DGPTHLAVILDKASRSFRHDLFPDYKANRPPPPEDLIPQFPLIRDATRAFSLPCIEEDLL
EADDLIASYARAATRRGWDVTIVSSDKDLMQLVGKCAEGGGCVDMLDTMKNARINIPEVQ
EKFGVLPEQLGDVLALMGDSVDNVPGVRGIGPKTASKLINEYGDLESVLTAAPDMKKSKM
KENLIEHAEMARLSRVLVQLKEDCDLPMALEDFALDGIPTDPLAAFLSKHGFTSLLKRLG
AGAGSPARPTDLNPAKAQNAAAENAPGATRQALPEWPKVDLDTYECVQSADRLDAWIARA
FAAHAVAIDTETSSLDAMRAELAGVSLALGPNDACYIPLGHGSDDMFAEKPEQIAMDEAL
AKLKPLLESDAVLKVGQNIKYDINVLARHGIAMGPVEDTMILSFDLDAGRGGGGIGQAHG
MDSLAETHLGHTTLTFKDICGTGKKQIPFSAVPLEKATRYAAEDADVTWRLWKVLRQRVA
DEGATRIYEQVDRPLIPVVAGMEREGIKVDRDFLSGLSAEFGGQIDAFEKEIHELAGEPF
TVGSPKQLGEILFDKMGYKGGKKGKSGQYSTDQSVLEGLAAQGVDMAARVLDWRQLSKLR
STYTEALQQAINPRTGRVHTSYSLVGAQTGRLSSTDPNLQNIPIRTETGRRIREAFVAEE
GNVLLAADYSQIELRLAAHMADVPPLKEAFANGEDIHARTALEMYGEVTRDTRAQAKTIN
FAILYGISRWGLAGRLGTDADEAQAVIDRYFERFPGIQRYIVATLEKVRECGYSETLFGR
KTHFRNINSKNQAERQGAERAAINAPIQGTSADIIKRAMARMIPALRDAGLNDVRMLLQV
HDELVFELPEGDVAAASPVIERVMAEAALPSVTLDVPLGIDIGTGKSWGEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgccgaaaccccgtcccgcaagccccatctctatctggtcgacggttcggcc
tatatcttccgggcctatcaccgcctgcccccgctgaccgacccggaaggcacgccggtc
ggtgcggtctatggctatacgacgatgctgtggaagctggcgcaggatctggacgatgcg
gatggtccgacgcaccttgcggtgattctcgacaaggcatcgcggtcgtttcggcacgac
ctgttccccgactacaaggcgaaccgcccgccgccgcccgaagacctgatcccgcaattt
cctctgatccgcgatgcgacgcgcgccttttcgctgccctgcatcgaggaagacctgctg
gaggccgacgatctgatcgccagctatgcccgcgccgccacgcggcgggggtgggacgtt
acgatcgtgtcttcggacaaggacctgatgcagctggtcggcaagtgcgccgagggcggc
ggttgtgtcgacatgctcgacacgatgaagaatgcccgcatcaatattcccgaagtgcag
gaaaagttcggcgtcttgcccgaacaactgggcgatgtcctcgcgctgatgggcgatagc
gtcgacaacgtgcccggagtgcgcgggatcggtccaaagacggcatcgaagctcatcaac
gagtacggcgatctcgaatcggtgctgaccgccgcgccggacatgaagaagtccaagatg
aaggaaaacctcatcgagcatgccgagatggcgcgcctgtcgcgcgtcctcgtgcagctg
aaagaggattgcgacctgccgatggcgctggaggacttcgcgctcgacggtatcccgacc
gatccgctggcggcgtttctgtcaaagcatgggttcacatcgctgctgaagcggcttggc
gcgggtgcgggcagcccggcgcggccaaccgacctgaacccggcgaaagcgcagaacgcg
gcggccgaaaatgcgcccggcgctacgcggcaggcattgcccgaatggccgaaggtcgat
ctcgacacctacgaatgcgtccagagcgccgatcggctggacgcatggatcgcccgcgcc
tttgccgcccatgccgtcgccatcgatacagagaccagctcgctcgacgcgatgcgcgcc
gaactggcgggggtcagccttgcgcttggccccaatgatgcctgctacatcccgctgggg
catggcagcgacgacatgttcgccgaaaagcccgagcagatcgcgatggatgaggcgctg
gccaagctcaagccgctgctggaaagcgatgcggtcctgaaagtcgggcagaatatcaag
tacgatatcaacgtgctggcgcgtcacggcatcgcgatggggccggtagaggacacgatg
atcctgtccttcgaccttgatgcagggcgcggcggaggcggcatcgggcaggcgcacggg
atggattcgctcgccgagacgcaccttggccacaccaccctgacgttcaaggacatttgc
ggcaccggcaagaagcagatcccgttcagcgccgtccccctcgaaaaggcgacccgctat
gccgccgaggatgcggacgtgacgtggcggctttggaaggtgctgcgccagcgcgtggca
gacgagggcgcgacgcgcatttacgagcaggtcgatcgcccgctgatcccggtcgtcgcc
gggatggagcgcgaggggatcaaggtcgaccgcgatttcctgtcgggcctgtcagccgag
ttcggcggccagatcgacgccttcgaaaaggaaatccacgaactggcgggcgaaccgttt
acagtcggcagcccgaagcagcttggcgaaatcctgttcgacaagatgggctacaagggc
ggcaaaaagggcaagagcgggcagtattcgaccgaccagtcggtgctggaagggctggcc
gcacaaggcgtggacatggccgcgcgcgtgctggactggcggcaactgtcaaagttgcgg
agcacctatacagaggcactgcaacaggcgatcaatccgcgtacggggcgggtgcacacc
agctacagccttgtcggggcgcaaaccgggcggctgtcttccaccgaccccaacctgcag
aacattccgatccgcaccgaaaccggtcgccgcattcgtgaagcttttgtggcagaggaa
ggcaacgtcctgctcgccgccgactatagccagatcgaactgcgccttgccgcgcacatg
gccgacgtgccgccgctaaaagaggcgttcgcgaacggagaggatattcacgcccgcacc
gcgctggaaatgtatggcgaagttacccgcgacacccgcgcgcaggccaagacgatcaac
tttgcgatcctttacggcatttcgcgctggggccttgccgggcggttgggcaccgatgcg
gacgaggcgcaggcggtgattgaccgctatttcgagcggttccccggcattcagcgctat
attgtcgcaacgctcgagaaggtgcgcgagtgcggctattccgaaacgctgttcgggcgc
aaaacccacttccgcaacatcaattccaagaaccaggccgagcggcagggggccgaacgc
gccgcgatcaacgcgccgatccagggcaccagcgccgacatcatcaagcgcgcgatggcc
cggatgatccccgcgctgcgcgatgcggggctgaacgatgtgcggatgctgttgcaggtg
cacgacgaactcgtcttcgaactgcccgaaggcgatgtcgccgccgccagccctgtgatc
gagcgtgtcatggccgaagcggcattgccctcggttacgctggacgtgccgctgggcatc
gacatcggcaccggaaaatcatggggcgaagcgcactga
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