KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBH1680
Entry
CNBH1680          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03020  RNA polymerase
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBH1680
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBH1680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBH1680
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBH1680
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNBH1680
  RNA polymerase III system
   RNA polymerase III
     CNBH1680
  RNA polymerase I system
   RNA polymerase I
     CNBH1680
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBH1680
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 4937688
NCBI-ProteinID: XP_773713
LinkDB
Position
8:complement(489391..490213)
AA seq 148 aa
MSDDERMDTGDFEGGDYEQDYVDPDTLNYENEENAEEEAANGEVDETMIIESGAPEGDRP
RTGKAAKPNEIRVTTPYMTKYERARVLGTRALQISMNAPVLVPVEGESDPLEIAIKELAA
KKIPLVIRRYLPDNSFEDWKVEELIVQE
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtctgacgacgagcgaatggacactggcgatttcgaaggaggtgactacgagcaggac
tacgtggaccccgataccctcaactacgagaacgaagaaaatgctgaggaagaggccgcc
aatggcgaggtcgatgaaaccatgatcatcgaatcaggtgctccggaaggcgaccgtccc
cgaacagggaaggctgctaagcctaatgagatccgagtgacgactccttatatgacaaag
tacgagcgagcaagagtactgggtaccagggctttgcagattagtatgaacgcccccgtc
cttgtgcccgtggaaggagaatcagatcctcttgagattgcgatcaaagagcttgccgcg
aagaagatccccctcgtcatacggcgataccttcctgacaactcttttgaggactggaag
gttgaggagctcatcgttcaggaataa

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