Cryptococcus neoformans var. neoformans B-3501A: CNBK2930
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Entry
CNBK2930 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03030
DNA replication
cnb03410
Base excision repair
cnb03420
Nucleotide excision repair
cnb03430
Mismatch repair
cnb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNBK2930
03410 Base excision repair
CNBK2930
03420 Nucleotide excision repair
CNBK2930
03430 Mismatch repair
CNBK2930
03440 Homologous recombination
CNBK2930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnb03032
]
CNBK2930
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBK2930
Enzymes [BR:
cnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNBK2930
DNA replication proteins [BR:
cnb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CNBK2930
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CNBK2930
MMR (mismatch excision repair)
DNA polymerase delta complex
CNBK2930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
4938993
NCBI-ProteinID:
XP_772922
LinkDB
All DBs
Position
11:complement(846118..850152)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAIQEPITKKRKLDISSQKELEPQPSFTEVLEQLVAEEDAAGDSIETSAAWPRPPVPPFD
AKKDTISFQQIEIEESADPKHGPTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKD
LQPLADKINSSISALGPCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPKNLSKVKDEFF
TLSTIDFNGLFPPEILTYESNIAYTMRFMIDTKIVGMNWVSIPGGRYDLLEGGSKKSQCQ
IEISCNYKDLISHPPENEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHG
ESKPFIRNVFTLNTCAHIVGSQVLEFKDERQLLLEWRKFVDTVDPDMIIGYNISNFDLPY
LLDRAKALKIPDFAFLGRLRNVRTEVKETHFSSKAYGQRDSKAVNMEGRLQLDILQVMQR
DYKLRSYTLNAVCAQFLGEQKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLMDK
LMCFVNYTEMARVTGVPFNYLLSRGQQIKVISQLYRNAADAGYVIPALKSEGSDEQYEGA
TVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVHTPNN
DFFATSKRRKGLLPHILENLLAARKRAKQDLKVEKDPFKRAVLDGRQLALKVSANSVYGF
TGATVGKLPCLAISSSVTAYGRQMIELTKKEVEAEYSMKNGYDHDAKIVYGDTDSVMVRF
GCPDLPTAMRLGAEAADLVSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKM
DTKGIETVRRDNCRLVSTVIETCLFKMLIDRDVKGAEDYVKDTIADLLQNKIDMSQLVIT
KALAKADYAAKQAHVELVERMRKRDAGSAPSLGDRVAYVIVKGVKGAAAYEKSEDPLYVL
EHNVPIDTRYYLENQLSKPLMRIFEPILGEKANSLLHGDHTRTIQIATPTIGGLMKFAVK
TVTCMGCRTPLRGKNESAVCVNCRPKLPELYQKQVAQTSALQIDFARLWTQCQRCQGSLH
QDVICTSADCPIFYRRTARQKEVASSVAQLDRFEKETGW
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggccatacaagaacccattacaaagaagagaaagctcgatatctcatcacagaaggag
cttgagccgcaaccaagttttaccgaagttttagaacagcttgtggccgaagaggatgcg
gcaggagatagcatagagacgtctgcggcgtggcctcgaccgccagtcccgccatttgat
gccaagaaggacacgatctcttttcagcagatcgaaatcgaagagtcagctgatcccaag
catggaccaacgctacggctatttggagtcaacaaaagcggtaattcagttttggcgcat
gtatatgggttcaagccatatttctacgttgcagcccctagcggtttcctcaacaaagac
cttcaacctctggccgataagatcaattcttctatatctgcgctgggtccttgtgtgact
aactgtgctatcttcaaccggcggtctctatggggttatcgaggagacgacaccgtaccg
ttcattaagatcaccgtatctgatcccaagaacctatcgaaagttaaagatgagtttttt
acattgtccactatagatttcaatggtcttttccctcctgaaattctcacctatgagagc
aacattgcatacaccatgcgtttcatgatcgatacgaaaattgtggggatgaattgggtc
agcattcccggtggacggtatgatctgctggaaggaggaagtaaaaaatcacagtgccaa
attgaaatctcatgcaactataaggacttgatttctcatcctcctgaaaatgaatggctg
gatattgcacctcttcgtgttctcagttttgacatcgaatgtgctggccgcaaaggcata
ttcccagaagcaaatgtggaccccgtcattcaaatcgccgcgatggtaacccgtcacggg
gaatcaaagcctttcattcgaaacgtattcaccctcaacacgtgtgctcatatcgtcgga
tctcaagtgctcgaattcaaagacgaaagacagcttcttcttgaatggcgcaagtttgta
gatacggttgatcctgatatgattatcggatataacatttctaatttcgatctgccctat
cttcttgatcgtgctaaagctttgaagatcccggactttgcctttttgggtcgactgcga
aatgtcagaaccgaagtcaaggaaacccacttttcttcaaaagcttacggtcagcgagat
tccaaagctgttaatatggaaggtcgacttcagcttgatattttgcaagtgatgcaacgg
gactacaagcttcgaagctatactctcaacgccgtttgtgcacaattcctaggtgaacag
aaggaagatgtccatcattccatcattacggagctccaaaatggtactgcggattctcgg
aggcgtctggctgtttactgtttaaaggatgcctatcttccacaacgtctgatggacaag
ttgatgtgttttgtcaactacaccgaaatggcacgtgtcacaggcgttcctttcaactat
ctcctgtccagaggtcagcaaatcaaggttatctctcagctttaccgaaatgccgcggat
gccggctatgttatccctgctctcaaaagcgaaggctccgatgagcagtatgaaggtgct
actgtcattgaacccagtaaaggtttctacgacgtgcccattgccactctggatttcgcg
tcactgtatccctcaatcatgatggcccataatttgtgttatacaacattattggataag
ggtactattgaaaggctgaagctcgtcgaaggagaagactatgtgcatacacccaacaat
gacttttttgcaacatccaaacgtcgaaagggacttctacctcacattctcgaaaatctt
ctggctgcccgaaagcgagccaagcaagatctcaaagttgagaaagatcctttcaagcga
gccgtgttggacggtcgacaacttgctttgaaggtgagcgccaactcggtctacggtttc
accggtgccaccgtcgggaaacttccctgccttgcaatttcctcaagtgttactgcctac
ggtcgacagatgatcgagctcaccaagaaggaagtcgaggcagagtactccatgaaaaac
ggttatgaccatgatgccaaaatcgtctatggtgatactgattctgtaatggtgcgattt
gggtgcccagatctgccaacagcgatgagactaggtgccgaggctgccgatctcgtatcc
ggcaaatttatcaaacccatcaagctcgaattcgaaaaggtctactttccttacctactt
atcagcaaaaagcgttacgccggtctctattggactcggccagagaaatacgacaaaatg
gatacgaagggtattgagactgtccgacgagacaactgtcgtttggtgtccacggtcatc
gaaacttgtctcttcaagatgcttattgatcgagatgttaagggtgctgaggactatgtc
aaggacactatcgccgatcttttacaaaacaagattgacatgtctcagctcgtgatcacc
aaagcccttgccaaagctgactatgccgccaaacaagcacacgttgaattagtagagagg
atgaggaagcgtgacgctggttcggctcctagtttgggtgatcgagtggcctatgtcatt
gtcaaaggcgttaaaggcgctgcagcgtacgaaaagtctgaagatcctctgtatgttttg
gaacacaatgttcccattgacacccgatattatctggaaaaccaactttcaaagccattg
atgaggattttcgagcctatccttggtgagaaagccaatagcttgcttcacggtgatcat
acaagaacaatccagattgccacacctaccattggcgggttgatgaagtttgcggtcaaa
acggtgacgtgtatgggctgtagaacccctcttcgaggcaagaacgagagtgccgtttgc
gttaactgtcgaccaaagcttccagaattgtaccaaaagcaagttgctcaaacctcagca
ttgcaaatcgactttgcgcgattatggacacaatgccagagatgtcagggctcactacat
caagacgttatttgcacctctgccgattgtcccatcttctatcgtagaacagctagacag
aaagaggtcgcctcatcagtagctcagcttgaccgtttcgaaaaggaaactggttggtaa
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