KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF04130
Entry
CNF04130          CDS       T00243                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit, putative
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNF04130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNF04130
Enzymes [BR:cne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CNF04130
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    CNF04130
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N YL1 DNA_pol_B_2
Other DBs
NCBI-GeneID: 3258454
NCBI-ProteinID: XP_024513042
LinkDB
Position
6:complement(join(1197291..1197433,1197501..1197597,1197654..1197887,1197944..1198128,1198179..1198277,1198331..1198550,1198609..1198741,1198797..1199071,1199125..1199292,1199352..1199498,1199546..1199873,1199922..1200166,1200218..1200790,1200838..1201217,1201265..1202287,1202342..1202552,1202638..1202706))
AA seq 1509 aa
MSKDALKTLLECRAKGGRLSLWKPEETKIYDSVTDEQYRSIVGSRNDQDDFIEDDDGGDY
VDHGLEDWDGAERDDEESEDEDDFEGEDEELRKARKLKRAKAKAKALASSGKAPKSLKPK
PKASYSDYSRRSTSSTYRAAAIPSAIQEDDFMANLLSSVTAASNETASRKRKSSPEIPSS
DGYQAPSSDSSFFSSRKRYGGDSDDEPVWDAKRGVMGKKPRVSDATITPRGMSRDRDQEN
EYSFDDTMDVEDVAVKPELVDSEEEEEIQVRKTRPLTATNKLNGAAGAKRKVINSTSVKN
VIKREPSPVLAIAPEAAPEIEEIQSVKPRTNGKPKVKANAKHWSAIQESLAASSSNQTSE
LDTVSAPVGSTKPENVMEKDGSLRFFWLDHLEQDGIVHLVGKVLDKQTGKYVSACVSVTG
IERCLYVKPRAKRFARGFETDLDVSEEDVLDEFENFRSQVGIDQYRCKFVKRKYAFEDKD
VEKGESDWLEVVYGFDRESCVRVYRLVLNKIEPAIPMDSNGATFSHIFGTNTTPFELFVV
NQKIMGPSWLEIKDIAPVEKASSWCKLEFYVTDPSEVNPFSETDPSAPKDTPPFTIMSIS
LRTIVNHRENKTEILSVSMRTWDNYNIEDPTPPDQLRSQLNTIVRPIERFPSGLESKARS
EKSQFQTVKTERALLNSMLGMIYRHDPDVIVGHNFLGGGFEALLYRMKELKADHWSRIGR
FRRKGMNVSKMGSNVKLMAGRLVADLSSDAAKGMISSTTWSLTEMTNTHLKVQREDIDPE
DTAGYFDHTATSPDRLIKFIRLCEVDAFFQMAIAARVQILPLTKQLTNLAGNSWNLTLNG
GRAVRNEFILLHEFHRLEYVCPDKAPYKAKTRPTGDDDEVTEDIIAMKGQRGKAKYAGGL
VFEPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTTVERDDDENAEEEKIPDVPSSDVPQG
VLPRIIATLVNRRRQVKALMKDKSATPAKLLQYDIKQQALKLTANSMYGCLGFAGSRFSS
RPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVNSNVTTYPEALKIANEFKKLV
NERYKLLEIDLDAVFERILLLNKKKYAAVKIDEAGERSTEVKGLDMKRREFSKVSKDASA
AILKEILSGEATEVVVEKIHELLTKLGEAVRNNEIPIDDYIIFKRLGKNPEDYPDKKSQP
HVQVALRMKQKGAAVRAHDVIPYIICLDEHGKGGKTASADRAFHPDDLRRQGSELRIDHE
YYLDQQILHPILRLCETIEGTERARLAECLGLDPLRYTSTGTAEAQEKEFFTFDSQISDN
DRFRDADPLNLVCPSCSEETVFVGLQTDASEVSNIRANGICCNSCQLVIHPASLQLQLEN
QIRSHISKYYLGWMTCDGEGCGLRTRAMSVYGKRCLGFIKENCWGTMRLEYTDAKLYNQL
LYYRSLFDVEKILNAVRGSQRFDEIRPLTTANQKVLSELVAVTDMYLDKNGRRYVDLKGL
FGFMERIKI
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgtcgaaggacgctttgaagactctgctggaatgtcgtgcgaagggtggccgactttca
ctttggaagcccgaagaaacgaagatttacgactccgtcacagacgaacagtatcgctcc
attgttggctcgcgtaacgatcaagacgactttatcgaggatgacgacggtggtgattat
gtcgaccacgggttggaagactgggatggtgcggagagagatgacgaggaaagtgaagat
gaagatgattttgaaggggaggacgaggagctgaggaaagcgcgaaaattgaaaagagct
aaggccaaagccaaagcactcgccagttctggtaaagctcccaaatcattaaaacccaaa
cccaaagcgagctactctgactattcccgacgctctacatcatcaacctatcgtgctgct
gccatccccagcgcgatacaagaggacgattttatggccaatctcttgtcctcagtgaca
gccgcttcaaatgagacggctagccgcaaacggaagtcttctccagagatcccgtcctcc
gatggttaccaagctcccagttccgatagctcgttcttttcatcgaggaagaggtacgga
ggggatagcgatgacgagcctgtatgggacgcgaagcgcggcgtgatgggcaagaagcct
cgggtttcagatgctactatcaccccgagagggatgagtcgtgacagggatcaagaaaac
gaatattcattcgacgatactatggatgttgaggatgtagctgtcaaacccgagcttgta
gacagtgaggaagaagaggagattcaagtgcgcaaaaccagacctctcacagcaaccaac
aaactcaatggtgcggccggtgctaagcgcaaagttatcaactcaacgtctgtcaagaac
gtaatcaagcgggagccctcacctgtccttgccatcgctccagaagccgcgccagaaata
gaagaaatacaatctgtcaagcctcgtaccaatggcaaacccaaagtcaaagcaaacgcc
aaacattggtccgccattcaagaatcccttgcggcatcttcctccaatcaaacatctgag
cttgataccgtcagcgcccctgttggttcaacaaagcccgagaatgtaatggagaaggat
ggttcattgagattcttctggcttgaccacttggagcaagatggaatcgttcatctcgtg
ggtaaagtgcttgacaagcaaacgggaaagtatgtcagcgcttgtgtctcggtgacggga
attgagcggtgtctctatgtcaagcctcgtgccaaacgatttgctcgtggatttgaaacc
gatctcgacgtgtcggaagaagacgttttagacgagttcgaaaacttccgttctcaagta
ggtatcgatcagtaccgttgcaagtttgtcaagcgcaaatatgcatttgaggacaaggat
gtggaaaaaggagaaagcgattggttagaggttgtctatggttttgaccgtgagtcttgc
gttcgggtttaccgactggtgctgaacaaaatagaacctgctatccctatggactcgaat
ggtgctactttcagtcatatctttggcacaaacaccactcctttcgagttgttcgtcgtt
aatcagaagattatgggtccttcatggcttgaaatcaaagatatcgctcctgttgagaag
gcttcatcatggtgcaagcttgagttctatgtgaccgatccctcagaagtcaacccgttc
tccgaaaccgacccttccgcacctaaagacacgcccccttttactatcatgtccatttcc
cttcgcaccatcgttaaccaccgcgagaacaagaccgagattctgtccgtctccatgaga
acatgggataattataacattgaagatcccacccctcctgatcaactccgatcgcaactc
aacaccatcgtccgacctatcgagcgatttcccagcggcctcgaatccaaagcgcgatca
gaaaaatcccaattccaaacggtgaaaacggagcgagcactactcaactctatgttgggt
atgatctaccgccacgaccccgatgtcattgtggggcataatttcttgggaggcgggttt
gaagcattactgtataggatgaaagagctcaaagcagatcattggtcgagaataggaagg
ttcaggagaaagggaatgaatgttagtaagatgggaagtaatgtaaagctcatggccggt
cgtttggttgcggatttatcaagtgatgccgccaagggtatgatttcatcaacgacctgg
tctctcaccgagatgaccaacacccacctcaaggtccaacgcgaagacattgacccagaa
gacactgccggttattttgaccatactgccacttcacctgatagattgatcaagtttatc
agactgtgtgaagtcgatgcctttttccagatggcgattgctgctagagtacaaatcttg
ccattgaccaagcagctgaccaacttggctggtaattcatggaatttgaccctcaacggt
ggtcgtgcggtccgtaatgagtttatccttctccatgagttccaccgacttgagtacgtc
tgtccagataaagcgccttacaaggcaaagaccagaccgactggggatgatgatgaggtt
acggaagacattatagcgatgaaaggccagagaggaaaagccaagtatgctggtggtttg
gtctttgaacctaaaagaggattgtgggacaagtacatcatcatcatggacttcaactcg
ctttatccaagtattattcaagaatacaacatcgattttacaacagttgagagggacgat
gatgagaatgccgaagaagagaagatcccagatgttccttcaagcgatgtacctcaaggt
gttctaccccgtattattgcgactctcgtcaaccggcgtcgtcaagtcaaggcccttatg
aaggataagtccgcaacccccgctaagctcttacaatatgatatcaagcagcaagctctc
aaactcactgccaactcgatgtacggttgtcttggttttgctggttctcgattctcctcg
agaccactggccgcattgacaaccttcaagggtcgagagattttaacgcacacccgggag
ttggctgagtctctgcagctcgacgtcgtctatggtgataccgactctgtctttgtcaac
tccaatgtcacaacctaccccgaagctctcaagattgccaatgagttcaagaagcttgtc
aatgaacgatataagctcctcgaaattgacttggacgccgtatttgaacgaatcttgctt
ctgaacaagaagaagtatgctgctgtcaagatcgatgaagctggggaaagaagtactgaa
gttaagggtttggatatgaagagaagagagttcagtaaggtttcaaaggatgcaagcgct
gcgatactgaaggagatcttgagtggtgaagctacagaagtcgtggttgagaagattcat
gaactcctcaccaagctaggagaggctgtacgcaacaacgagattcctatcgatgactac
atcatcttcaagcgtcttggtaaaaaccccgaagattacccagacaagaaatctcaaccc
cacgttcaagtcgctcttcgtatgaaacaaaaaggtgccgctgttcgagctcatgatgtt
attccctatatcatctgcttggacgaacatggaaagggcggaaagacggcgtctgcggat
cgggctttccatcctgatgatttgagaaggcaagggtcggaactgagaattgatcacgag
tactaccttgatcagcaaattttacatcccatattgaggttatgtgagactatagaaggc
actgagcgagcacgattagcagaatgtcttggtcttgatcctttgagatatacctcgaca
ggcacagccgaagctcaggaaaaagagttcttcacttttgattcccagatttcggacaac
gatcgtttccgcgatgctgatcccctcaatctcgtctgtccatcttgtagcgaggaaaca
gtatttgtaggcttgcagactgacgcttctgaagtgtccaatatccgagcaaacggtatt
tgttgcaattcttgtcagttagtcatccaccccgcctctttacaactccagctcgaaaac
caaattcgatcccatatctcaaaatactatcttggatggatgacttgcgatggcgaaggt
tgtggattgagaacgagggccatgagtgtatatggaaagagatgtttagggtttatcaag
gagaattgctggggtacaatgaggcttgagtacacggatgcaaaactgtacaatcagctc
ttgtattaccgtagtctgtttgacgttgagaagatcctaaatgctgtgcgaggctcgcaa
cgtttcgacgaaatccgacccttgacaaccgccaatcaaaaagttttatcagaacttgta
gctgtcacagacatgtaccttgacaaaaacgggagaagatatgtcgatttaaaggggctg
tttggattcatggagaggattaagatttga

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