KEGG   Cryptococcus neoformans var. neoformans JEC21: CNI02630
Entry
CNI02630          CDS       T00243                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III 17.1 kda polypeptide, putative
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03020  RNA polymerase
cne03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNI02630
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNI02630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNI02630
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNI02630
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNI02630
  RNA polymerase III system
   RNA polymerase III
     CNI02630
  RNA polymerase I system
   RNA polymerase I
     CNI02630
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNI02630
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 3259437
NCBI-ProteinID: XP_024513535
LinkDB
Position
9:join(706215..706262,706319..706352,706415..706680,706731..706771,706820..706928)
AA seq 165 aa
MAESSNIIFDDRFTVDTVDKDGKKFDRVSRITATSHSLSMSLTLDIANELYPLEQSETFT
LTLARSLVPSELETLDSRADGDEGEEGSEVRRVKRELWRSHEQGLAEDYDYVMYGKIYKF
DDSAQGEAQTTAYFSFGGLLMALRGSYRHLAGVVVGENVYLLMRK
NT seq 498 nt   +upstreamnt  +downstreamnt
atggccgaatcatccaatatcatctttgacgacaggttcaccgtcgatactgtagacaag
gacggcaagaaatttgaccgagtgtcccggataaccgcgacgtcgcattcgctttccatg
tccctcacgctcgacattgccaacgaactctacccactcgaacagtctgaaacgtttacg
ctcacactcgcgcggtcgctggtcccgtcggagctggaaacgttggatagtcgtgcggat
ggggacgaaggcgaggaggggagcgaagtgcggagggtgaagcgagagttgtggaggagt
catgagcaagggttggcggaagattatgattatgtcatgtatggcaagatttacaagttt
gacgattcggcgcaaggggaggctcagaccacggcatacttttctttcggtggactgctc
atggctctccgtggatcctatcgacatcttgcgggggttgttgttggagaaaacgtgtat
ttgctcatgcgcaagtaa

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