Chryseobacterium nakagawai: EG343_08420
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Entry
EG343_08420 CDS
T06300
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cnk
Chryseobacterium nakagawai
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnk03009
]
EG343_08420 (rimO)
Enzymes [BR:
cnk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EG343_08420 (rimO)
Ribosome biogenesis [BR:
cnk03009
]
Prokaryotic type
ribosomal protein modification factors
EG343_08420 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZA90646
UniProt:
A0AAD0YNX2
LinkDB
All DBs
Position
complement(1882783..1884084)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVKEIPDVDQYFGTRDLPLLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLA
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLGKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVREQKFDRLGCFTYSHEENTGAYVLEDDIAQEVKEARVEEIMELQSQ
ISWEKNQEKVGKVFRCMFDRKEGNYFIGRTEYDSPDVDNTVLVSAEDTYISIGEFANVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctgtagggaagaaaaaaatcaatgtagttacacttggatgttccaaa
aatgtatatgactctgaagtattaatgagccagttgaaagccaatgggaaggaagtggtt
catgaagatcgcggagatattgtggttattaatacctgcggatttattgacaatgctaaa
gaagaatcaattaatactattctagattatgtagaggctaaaaatagaggtgaagtagaa
aaagtattcgttacagggtgcctttccgaaagatacaagccggatttggtaaaagaaatt
cctgatgtagatcagtattttggtacaagagatcttcctttattattaaagcatcttgga
gcagactacaagcatgaattggtaggagagcgattaacaactacaccaaaacactatgca
taccttaaaatttcagaaggatgtgacagaccatgttctttctgtgcaattcctttgatg
agaggtgggcacgtttccactccaattgaaaagttggtttctgaagctcaaaaactggcg
aaaaaaggaacgaaagaattaattcttattgctcaggatcttacttattatgggttggat
atttataaaaaaagagcattgggagatttattgaaagaattggtaaaagtagaaggagta
gaatggattcgtcttcattatgctttcccaagcggtttccctgaagatgttttggatatt
atccgtgaagaacctaaagtttgtaattatatagatattcctcttcagcatatcaattct
gatctgttgaaatctatgaaaagaggaactacccatgagaagactgatgctcttttagga
aaattcagagagaaagttcctgatatggccatcagaacaaccctgattgtaggatatccg
ggagaaacggaagaaagattccaggaacttaaagattgggtaagagaacagaaatttgac
agattgggatgttttacctattctcatgaggaaaatacaggtgcttatgtattggaagat
gatattgcacaagaagtaaaagaagcaagggtagaagaaatcatggaactgcaatctcag
atttcatgggaaaagaaccaggaaaaagtaggaaaggtattcagatgtatgtttgatcgt
aaggaagggaactactttattggaagaacagaatatgattctccggatgtagataatacc
gttttagtgtcagctgaggatacctatatttcaattggggaattcgcaaatgttaagatt
acttcggccgaagaatttgacttatatggtgaattaatataa
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