Contarinia nasturtii (swede midge): 116337222
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Entry
116337222 CDS
T08003
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
cns03013
Nucleocytoplasmic transport
cns03250
Viral life cycle - HIV-1
cns04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116337222
03008 Ribosome biogenesis in eukaryotes
116337222
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116337222
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
116337222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116337222
03009 Ribosome biogenesis [BR:
cns03009
]
116337222
03016 Transfer RNA biogenesis [BR:
cns03016
]
116337222
03036 Chromosome and associated proteins [BR:
cns03036
]
116337222
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116337222
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116337222
Pre-60S particles
116337222
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116337222
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116337222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
AMP-binding
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
116337222
NCBI-ProteinID:
XP_031617479
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MAKEVITKVRPASEFSTTKRDDAVKLRVGTEGVAAQEPLTLPYVLYRTAKNYPDVAALKH
KNAEGTWDTVTYSQYRENVLKTAKVFIKLGLEPKNTVAILAFNSPEWFYSELGAIHAGGF
AAGVYTTNSAEAVYHVLHSSNANIVVVDDTKQMDKIKEIKHRLPNLKAAVQLYGPYEPYV
KREDGYYRWSEIQEMDLTGAEEELEKRMENIHSNDCCVLVYTSGTVGNPKGVMLSHDNVT
WSANAVANCLTNMVVGGENLISYLPLSHIAAQMIDIFIAINYVATVYFADKDALKGSLVK
TLQEANPTRFVGVPRVYEKIYEKMTAIGSQITGIKKLISTWAKSVTLQHWQEAIDGKDAQ
SLQYKIAKNFILSKVKSALGLNQCKLLITAAAPMSPEIKQYFMSLDLPMFEAFGMSESGG
AHCVSTADNFNLTTVGKPLPGVETLIVNKDENGHGEVCMRGRHVFMGYINEVDKTTEAID
DEGWLHSGDLGYIDQNGLVYITGRIKELIITAGGENIPPIHVEQLVKKELPALSNAFLVG
DKRKFLTMLVTLKTEIDLETGAPKDELAPDTLTWFKTLGVDYKLLSEVLEAGPCPKVYAA
INDGISRANKHATSNAQKIQKFTILPSDFSIPTGELGPTLKVKRNVVTKKYEDIIDKFYK
TTTTMTTQVNMEEASKLLDFSQKLDIGLLDNIVGSVYVSQGEQLRLAQDVLTTLKEHPDA
WTRVDSILEYSSNQQTKYYALQILEEVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPAV
METNKVYLNKLNMILVEILKREWPKNWETFIGDIVGASKTNESLCQNNMVILKLLSEEVF
DFSSGQITQTKAKHLKDTMCSEFSQIFQLCSFVLEGSMNAPLIAVTLETLLRFLNWIPLG
YIFETTLVETLIFKFLNVPMFRNVSLLCLSEIAGLTVPNYNNIFTDMFKKTMSQFEQMIH
PGTNMNQVYATGSDAEQNFIQNLAVFLSTFLKEHGALVEGAETAEALKKALMYLVMISEV
EDVEIFKICLEYWNSLASDLYQDSVALAPSGGISLWSGASNSRRQFYSDILSKVRYIMIS
RMAKPEEVLVVENENGEVVREFMKDTNAINLYKNMRETLVYLTHLDYADTEHIMTEKLNN
QVNGTEFSWKNLNTLCWAIGSISGAFLEEDEKRFLVTVIKDLLGLCEQKKGKDNKAIVAS
NIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVTM
QPNEACTFIDEILASMSSIICDLQPQQVHTFYEAVGCMISAQVDQAAKDALIEKYMALPN
QVWDEIISQASKNVDYLKNMAAVKQLGSILRTNVRACKALGHSFVLQLGRIYLDMLNVYK
IMSENIIQAITVNGVAVNNQPLIKAMHVVKKETLTLISEWVVRSNDNNVVIDSFIPPLLD
AVLLDYQRCKVPEAREAKVLSTMAAIVGKLKVSITSEIPQIFDAVFECTLDMIKKNFEDY
PQHRVAFYELLQQVNAHCFDAFLNIPPAQFKLVFDSIVWAFKHTMRNVADMGLQILYVML
TNIEQSSPSAAQGFYQTYFTDILTQIFSVATDTSHTAGLQLHAQILAYMFTLVETGKITV
NLGPIPDNTIYIQEYVASLLKSAFNHLTDNQIKVFVTGLFNLDQEVSAFKEHLRDFLIQI
REITGDDDSDLYLAEREEELKNAQNTKRLQQMSVPGILGPHEQPESMQDELDLS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaggtaatcaccaaagtgcgaccagcatccgaatttagcacaacaaaacgt
gatgatgcagttaaactgcgagttggcaccgaaggcgttgcagcccaagaaccgctcaca
ttaccatatgttttgtatcgaacggccaaaaattatcccgatgtggccgcattgaaacat
aaaaatgctgagggtacttgggatacggttacatacagtcaatatcgtgaaaatgtctta
aaaaccgccaaagtattcatcaaattaggcttagaaccaaaaaacacagtcgctattttg
gcatttaattcacccgaatggttttattccgaattgggtgcgattcatgctggtggattt
gcggctggtgtgtatacgacaaattcggcagaagctgtttatcacgtacttcatagctca
aatgcaaacattgtcgtcgttgatgacaccaaacaaatggacaaaattaaagaaattaaa
catcgtctgccaaatctgaaagcagccgttcaattgtatggaccatacgaaccatatgtt
aaacgagaagatgggtattatcggtggtcagagattcaagaaatggatttgactggcgcc
gaagaagaattggaaaaacgtatggaaaatattcattcgaacgattgctgtgttttggtg
tatacgtccggaaccgttggaaatccaaaaggtgtgatgttaagtcatgacaatgtaaca
tggagtgcaaatgcagtggccaattgtttaacaaatatggttgttggtggcgaaaatttg
atatcatatttaccgctcagtcatattgccgctcaaatgattgatattttcattgcgata
aattatgtggccaccgtttactttgccgacaaagacgctctgaaaggttctctagtgaaa
actcttcaagaagcaaatccaacgcgttttgttggtgtgccgcgtgtttatgaaaaaatc
tatgaaaaaatgacggccattggatcacaaataactggcatcaaaaaattgataagcaca
tgggcaaaaagtgtaacactacaacattggcaagaagcaattgatggaaaagatgcacaa
tcacttcaatataaaattgcaaagaatttcattttgtcaaaagtaaagagtgcactcggt
ttgaatcagtgtaaattattgattacagccgccgcaccaatgtcaccagagatcaaacaa
tattttatgagcttagatttaccaatgtttgaagcatttggcatgtcagaatcgggcggt
gcacattgtgtttcgacagcggacaatttcaatttgacaaccgttggcaaaccattgccc
ggcgtcgaaacattgatcgtaaacaaagacgaaaatggccatggtgaggtatgcatgcgg
ggacgacatgtttttatgggatacattaatgaagttgacaaaacaactgaagctattgat
gacgaagggtggttacattcaggcgatttgggttatatcgatcaaaatggtctggtgtat
atcaccggacggattaaggaattgatcatcacggccggcggtgagaacataccaccaatt
catgttgaacaattggttaaaaaagaattgccagcactcagtaatgcattcctcgtcggt
gacaaacgcaaatttcttacaatgcttgtaactcttaagactgaaatcgatctagaaact
ggtgctccaaaggatgaactggcgccagacacactcacctggttcaaaacgttaggtgtt
gattataaattattgagtgaagttctagaagctggaccatgtccaaaggtttacgctgcg
ataaatgacggcattagtcgtgccaacaaacatgcaacatcaaatgcacaaaagatccag
aagtttacaattttgccatctgacttctccataccaaccggtgaattgggtccaacactt
aaggttaagcgtaatgtcgtaacgaaaaaatatgaagatatcattgataagttctataaa
acaacaactacgatgacaacccaagtgaatatggaggaagcgagcaaattgcttgacttc
agtcaaaaattggatatcggtttgctcgataatatagttggttcggtgtatgtaagccaa
ggtgaacagttgcgattggcacaagatgtgctgaccacactcaaagagcatccggatgcg
tggacgcgtgtagatagtattttagaatattcatcaaatcaacaaaccaaatactatgcc
ctgcaaattcttgaagaagtgataaaaacgcgctggaagatattgccgcgtaatcaatgc
gaaggcattaaaaaatatgttgtaggcttaattataaaaacatcatccgatccagctgtt
atggaaacgaataaagtctacttgaacaagctcaatatgattttggtggagattttgaag
cgtgaatggccgaaaaattgggaaacattcatcggtgacattgttggtgcatcgaaaaca
aatgaaagtttgtgtcaaaacaatatggtcattttaaaattgctgagcgaagaagtgttc
gatttcagttcgggacaaataacacaaacaaaagccaaacatctgaaagatacaatgtgc
tcagaattttcacaaatattccaattgtgctcattcgtgctggagggttcaatgaatgca
ccactaattgccgtcacattggaaacattgttgcgatttttgaattggattccgcttggt
tacattttcgaaacgacgctcgtcgagacgttgatattcaaatttctaaacgtaccaatg
ttccggaatgtgtcattgttatgcctgtctgaaattgctggtcttactgtgccgaactac
aataacatattcaccgatatgttcaaaaagacgatgtcacaattcgagcaaatgattcat
ccgggaacgaatatgaatcaagtgtacgccactggttcggatgcggagcaaaattttatc
caaaatttggccgtatttctgagcacatttttaaaggagcacggtgcattggttgaaggt
gccgaaacggctgaagcattgaaaaaagcactcatgtatttggtcatgatttccgaggtg
gaagatgtggaaattttcaaaatttgcctggaatattggaacagtttggctagtgactta
taccaagattccgttgcattggcgcccagtggtggcatttcactctggagcggcgcatcg
aatagccgacgacaattctattccgatattttatcgaaagttcgatatattatgatctct
cgcatggcaaaaccggaagaagtgttggtcgtcgaaaatgaaaatggtgaagttgttcgc
gaatttatgaaagatacgaatgccatcaatttgtacaaaaatatgcgcgaaacattggtc
tatttaacacatttagattatgcagacaccgaacacataatgaccgaaaaattgaacaat
caagtgaatggcaccgaattctcatggaaaaatctcaatacgctgtgttgggcgatcggt
tcaatttcgggtgcattcttggaagaggatgaaaaacgctttttggtcacggttatcaaa
gatttgctcggtttgtgcgaacaaaagaaaggcaaagataataaagcgattgttgcatcg
aatattatgtatgtggtcggacagtatccacgatttttgcgcgctcattggaaattcttg
aaaaccgtcgttaataaattgtttgaatttatgcacgaaacacacgatggtgtacaagat
atggcatgcgatacattcattaaaattgcacaaaaatgtcgacgacattttgtcaccatg
caaccaaacgaagcgtgcacattcatcgatgaaattctggcgtccatgagctcaatcatt
tgtgatttgcaaccacaacaggtgcacacattctatgaagccgttggatgtatgatatca
gctcaagtggatcaagcggccaaagatgcattgatcgaaaagtatatggcgttgccgaat
caagtgtgggacgaaatcatatcgcaagcatcgaagaatgtagattacctgaaaaatatg
gcagccgtcaagcaattgggaagcattttgcgaacaaatgttcgtgcatgcaaggcgctc
ggccattcgtttgtcctgcaattgggtcgcatctacttggatatgttgaatgtgtacaaa
atcatgtcggagaacattattcaagcgatcacggtgaatggtgttgccgtcaacaatcag
ccactgattaaggcaatgcatgtggtgaaaaaagaaacacttacattgatttccgaatgg
gtggtacgatcaaatgacaataatgttgtcattgatagttttataccgccattgcttgat
gctgttttgcttgattatcagcgatgcaaggtgcccgaagcacgtgaagctaaagtactg
agcacaatggcagccattgttggtaaactaaaagtcagcatcacatcagaaataccgcaa
attttcgacgctgtattcgaatgtacgcttgacatgattaagaaaaatttcgaagactat
ccacaacatcgggtggcattctatgaactgttacaacaagtgaatgcacattgttttgat
gcatttttaaatataccgccagcccaatttaaattggtattcgattcaattgtgtgggca
ttcaagcatacgatgcgcaatgttgccgatatgggattgcaaattttatatgtcatgctc
acaaacattgaacagagttcaccgtcagcagcacaaggcttttatcaaacatacttcacg
gatattttgacacaaatattttcggtagctacagatacatcgcatacagctggtttgcaa
ttgcatgctcaaattttggcttacatgtttacattggtcgaaacgggtaaaattaccgtc
aatctcggcccaattccagacaatacaatctatatccaagaatatgttgcatcgctgctg
aaatctgcatttaaccatttgaccgataaccaaattaaagtgtttgtaaccggcctcttc
aatttggaccaagaagtgtccgcattcaaagaacatttacgagatttcctcattcaaatt
cgagaaataactggcgatgatgattccgatttgtatttggctgaacgtgaagaggaattg
aaaaatgcacaaaatacaaagaggctacaacagatgtcggtgcctggtatccttggtcct
catgaacaacccgaatcaatgcaagacgaattagatttaagttaa
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integrated database retrieval system