Contarinia nasturtii (swede midge): 116343907
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Entry
116343907 CDS
T08003
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116343907
Transporters [BR:
cns02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116343907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116343907
NCBI-ProteinID:
XP_031628087
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MNDMTNEEGNRNIEKDGSGANTNLSDMRRTISNASGTLSNHQQQQQQQQQQQQQQPNGSV
GDGLSDENNSGAEGSASDDCGDKMAKESDPLQPKMVKSRSSHKVKERLTVVSIIPDRERE
TWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLIPYCIMLVLGGLPLFYMELALG
QFHRCGCLTIWKKICPALKGVGYAICLIDVYMGMYYNTIIGWAVYYLYASFTYELPWTSC
NNEWNTASCKPVSQQANLTNATSPAREFFERSVLEQHKSNGLDYMGPIKPSLAICVFSVF
VLVYFSLWKGVRSAGKVVWVTALAPYVVLIFLLIRGVTLPGAAEGIRYYLTPQWHKLKNS
KVWIDAASQIFFSLGPGFGTLLALASYNKFNNNCYRDALLTSSINCLTSFLAGFVIFSVL
GYMAHIQDKTVDKVGLEGPGLVFIVYPEAIAMMSGSVFWSIIFFLMLITLGIDSTFGGLE
AMITALCDEYPRMLGRRREIFVLVLLIGIYLCALPTTTYGGVYLVNFLNVYGPGLAILFV
VFVEAAGVFWFYGVDNFSTDVESMLGQRPGLYWRVCWMYISPTFLLVIFIFSLLGYEEML
GEEYEYPDWSIALGWTLTLSSILCIPLYIVYKILITPGTIQYRFTNSFRPEEAQPTAIPG
QILCGGTAV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgacgaatgaggagggaaatcgtaatattgaaaaagacggtagcggtgca
aatacgaatttgtctgatatgcgtcgaaccatttcaaatgcatctggaacactttcgaat
catcaacagcagcagcagcagcaacaacaacagcaacaacagcaaccgaatggtagtgtt
ggtgacggtcttagcgatgagaacaatagcggtgccgaagggagtgcttcagatgattgt
ggtgataaaatggccaaagaaagtgatccattgcaaccaaaaatggtgaaatcgagatca
tcgcataaagttaaagagcgtttaacggttgtgtcaatcataccagatcgggaacgtgaa
acctggggtcaaaaggctgaattcttattggccgttattggatttgcagttgatttggga
aacgtttggcgtttcccttacatttgttatcaaaacggcggcggtgcatttttaatacct
tattgtattatgttggttcttggtggtttgccattgttttacatggaattggctctggga
caatttcatcgatgtggctgtttaaccatttggaagaaaatatgccccgcattaaaaggc
gttggttatgcaatctgtttgatcgatgtatacatgggtatgtattacaatacgataatt
ggatgggctgtttactatctgtacgcatcatttacctatgagctgccgtggacgtcatgc
aacaacgaatggaatacggcatcttgtaaaccagtatcacaacaagccaatctaacaaat
gcaacaagtcctgccagagaatttttcgagcgaagcgttttggaacagcataaatcgaat
ggtttggattacatgggaccgataaaaccgtcgttggcaatttgtgtatttagcgtgttt
gtgctcgtctatttttcactatggaaaggtgtacgaagcgctggaaaagtagtttgggtt
acagcattagcgccatacgttgtactcatttttctattgattcgtggcgttacgttgcca
ggtgccgccgaagggattcgatattatcttacaccacaatggcataaactaaaaaattcc
aaggtgtggattgatgccgcatcacaaatattcttttcattaggaccaggatttggtaca
ctactcgcacttgccagctacaataaattcaacaataattgctatcgagacgcattactt
accagtagtataaattgtttaacaagctttttagctggttttgtaatattctctgtgctt
ggttacatggcgcatattcaggataaaacggtcgataaggtgggtctggaagggccgggt
ttagtatttatcgtgtatccagaggcaatagcaatgatgagcggttcggtgttttggtcc
ataatatttttcctcatgttaattacacttggaatagacagtacatttggcggccttgaa
gcaatgataacagccttatgcgatgaatatccacgaatgcttggacgccgccgtgaaata
ttcgtgctagtattgttgattggtatttatctatgtgctttaccaacgacaacttatggt
ggtgtttatttggtcaattttctaaatgtgtatggtcctggtttggcaatactgttcgtt
gtatttgtcgaggcggccggtgttttttggttttatggcgttgataatttttccaccgat
gttgaatcgatgcttggccaaagacccggactatattggcgtgtatgctggatgtacatc
agtccaacatttttgcttgtgattttcattttttcattgcttggatatgaagaaatgctg
ggcgaagaatacgaatatcccgattggagtatagcacttggttggacacttacgttgtct
tcaatactttgcattccattgtatattgtgtacaaaatcctcatcactccaggaactata
caataccgtttcacaaactcatttagaccggaagaggcccaaccgactgcaattcccggg
caaattttatgcggtggaactgcggtgtga
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