KEGG   Contarinia nasturtii (swede midge): 116344354
Entry
116344354         CDS       T08003                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03020  RNA polymerase
cns03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116344354
  09124 Replication and repair
   03420 Nucleotide excision repair
    116344354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cns03021]
    116344354
   03400 DNA repair and recombination proteins [BR:cns03400]
    116344354
Transcription machinery [BR:cns03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116344354
  RNA polymerase III system
   RNA polymerase III
     116344354
  RNA polymerase I system
   RNA polymerase I
     116344354
DNA repair and recombination proteins [BR:cns03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116344354
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 116344354
NCBI-ProteinID: XP_031628711
LinkDB
Position
Unknown
AA seq 210 aa
MDDEAETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLDQFKESFGDKPSEKRPARSDLIV
LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQQGMTPSAKQSLVD
MAPKYILEQFLESELLINITEHELVPEHVVMTPEEKQELLARYKLKENMLMRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagctgaaacttacaaattatggagaattcgtaaaactgttatgcagtta
agccatgatcgtggctatctcgtaacccaagacgaattggatcaaacgctggaccaattc
aaggaatcatttggtgataagccaagtgaaaagcgtccagctcgttcggatttgattgtt
ttggtggctcacaacgatgatccaacggatcaaatgttcgttttcttccccgaagaaccg
aaaattggcatcaaaaccattaaaacatactgtacccggatgcaagaagaaaatattcat
cgtgccattgtggtcgttcaacagggcatgacaccatcagcgaaacaatcactggttgac
atggcaccgaaatacattttggaacaatttctggaatcggaattactaatcaacattacc
gaacatgaattggtaccggaacatgttgttatgacacccgaagaaaaacaagagctattg
gctcgttacaaattgaaagagaacatgttgatgcgtattcaagctggtgatccggttgca
cgatattttggtttgaaacgtggccaagtggtgaaaattattcgtccatcggaaaccgcc
ggtcgttatatttcctatcgtttagtgtgctaa

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