Contarinia nasturtii (swede midge): 116345112
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Entry
116345112 CDS
T08003
Name
(RefSeq) beta-galactosidase-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00052
Galactose metabolism
cns00511
Other glycan degradation
cns00531
Glycosaminoglycan degradation
cns00600
Sphingolipid metabolism
cns00604
Glycosphingolipid biosynthesis - ganglio series
cns01100
Metabolic pathways
cns04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
116345112
09103 Lipid metabolism
00600 Sphingolipid metabolism
116345112
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
116345112
00604 Glycosphingolipid biosynthesis - ganglio series
116345112
00511 Other glycan degradation
116345112
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116345112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116345112
Enzymes [BR:
cns01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
116345112
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116345112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
116345112
NCBI-ProteinID:
XP_031630053
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MDKAEHRDHVNHILTYHFKNVVTIVIEKSIVCCEKMRLQTNLLIVSALFILQTRSHSNTV
HRSFRIDYENDCFLKDGQPFRFVAGSFHYFRALPDTWRQKLRTMRAAGLNAVTTYVEWSL
HNPKPDTFIWNGMGDIEQFIRLAAEEDLLVILRPGPYICAERDMGGFPYWLLRRYPGIKM
RTYDTDYLKEVRIWYNSLFPRITRYLYGNGGPIIMVQVENEYGSFACDRNYSLWLRDETL
SFVGDKAVLFTNDGPSQLPCGKIDNVLATLDFGSASRNSIDQTWRRLREFQPKGPLVNAE
YYPGWLTHWQEPLSRVESQPVVDSLRFMLDVGASVNFYMFFGGTNFGFTAGANDGGPGKY
QADLTSYDYDAPMDEAGDPTPKYMLIRDAIKDYLPLPNISVPARAPKMTLPPVRLIPKMT
LLSPIARQKFGQPSIRSRIPLTFEQIDQNSGFVLYEAVLPPLNFDPSIFAIPKLNDRAIV
LIDDMVVGYLSRENLVNAVGLNAGFSGKTVQVLVESQGRINYNVMNDFKGIIGNVQVNNM
PLLNWTMTGFPLEDVEQIEDLISERIENDILENSGRSTADFSTDIMKNGPRIFHATFNID
AAEIHDTYINPSGWGKGIIFINGFNLGRYWPLVGPQITLYLPKQLLRRRNNLLILIELQK
SANNGYITFSNYHIFNTKIPQDDN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagccgagcatagagatcatgttaatcacatattgacctatcactttaaaaac
gttgttacaattgtaattgagaaatcgatcgtatgctgtgaaaaaatgcgattacaaacc
aaccttttgattgtttcggcactgtttatactacaaactagaagccattcaaatacagtg
catcgaagttttcgcattgattacgaaaacgattgttttttaaaagatggacagccgttt
cgttttgttgctggttcgtttcattattttcgagcgttaccagatacttggcgccaaaaa
ttgcgcacaatgagggcagccggtttgaatgcagtcacaacgtatgttgaatggtcactg
cacaatccaaaaccggatacattcatttggaatggaatgggtgacattgaacaatttata
cgattagctgccgaagaagatttattagttattcttcgacccggaccgtatatctgtgcc
gaaagagatatgggtggtttcccatattggcttttgagacgttatccaggaattaaaatg
cggacatatgatacggattatctaaaggaagttcgcatttggtataattcactttttcca
agaataactcgttatttgtatggaaatggaggtccaattataatggtacaagtggagaat
gagtatggatcgtttgcctgtgatagaaactattcactctggttacgagatgagacgtta
tcgtttgttggtgacaaagcggttctttttactaatgacggaccgtcacaattgccttgt
ggaaaaattgataacgtattagctaccttagactttggatctgcatcgcgcaatagtatc
gatcaaacttggagaagactacgtgagtttcaaccaaaaggaccgcttgtaaatgctgaa
tattacccaggctggttgacacattggcaagagccgttgtcaagggttgaatcacagcct
gtagttgattcgcttagattcatgttggatgtaggtgccagtgttaatttctatatgttt
ttcggtggaacaaattttggatttacagctggtgcaaatgatggtggtcctggaaaatat
caagccgatttaacatcgtatgattatgatgctccgatggatgaagcgggtgatccaacg
ccaaaatatatgctaattcgagatgccataaaggattatttaccattgccaaatatttcg
gtgccagcacgtgcaccaaaaatgacactacctcccgtgcgattaataccaaaaatgaca
cttttatcgccaattgcacgacaaaaattcggtcaaccatcaatccgatcacgtattcca
ttaacctttgaacaaatcgatcaaaattctggttttgtgctgtacgaagccgttttgccg
ccacttaatttcgatccatccatttttgccataccaaaactaaacgatcgagctatcgta
cttattgatgatatggtcgttggttatctatcacgagaaaatctcgtaaatgcagtaggt
ttgaatgcgggattttcaggaaaaacagtccaagtgttggttgagagccagggtcgtatc
aattacaatgtaatgaatgatttcaaagggataatcggcaacgttcaagtgaataatatg
cctttgttaaattggacaatgaccggttttccgttagaagatgttgaacaaattgaagat
ttaatttccgaacgcatcgaaaacgatatccttgaaaattcgggccgatcgacggcagat
ttcagtacagatattatgaaaaatggccctagaatttttcatgcaacattcaatattgat
gcagctgaaattcatgacacatatataaatccatctggatggggaaagggaataatattt
atcaatggcttcaatttgggccggtattggccactggttggacctcaaattacattatac
ctaccaaaacaactattacggcgacgaaacaatttgctaattctgattgaacttcaaaaa
tccgctaacaatggatatatcacatttagtaattatcatattttcaatacaaaaatacct
caagatgacaattga
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