Contarinia nasturtii (swede midge): 116348037
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Entry
116348037 CDS
T08003
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116348037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116348037
Enzymes [BR:
cns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116348037
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116348037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
V-ATPase_G
DUF6018
Motif
Other DBs
NCBI-GeneID:
116348037
NCBI-ProteinID:
XP_031634747
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MPKEQFREADVIKKISHVQFGIDSPEEIQQEAHIRIVSKNLYNDGRQPMAFGVLDRRMGV
SQKDAQCVTCNQGLNECVGHFGYLDLALPVYHVGHFRSTIQILQAICKTCARVMLKDADK
QVYGRRLLNQNLSYLAKKSITAQILAKAKKHTKCPNCSAINGPVKKGPGLMKIWHEPFRG
KKTTDPIMQEHLHELQDATSRNRELASMIGPSSMICEMNPLQVLDLFKRIPKSDVPLLGM
TSPDSNPANLIVTRVFVPPVCIRPSVVSEIKAGTTEDDLTMKQSEILLINDVINKHMTSG
HKIEQVQEDWDFLQLHVSLYFNSEVSGIPMTMLPRQSSRGIVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLMIHQVGVPERVAKILTYPERVNDANLQRMKQLVRNGTEKHPGANY
VQQKGLSFKKYLAYGNREKVAQDLKRGDIVERHLTDGDIVLFNRQPSLHKMSIMSHQAKV
QPQRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNQSNLVTPKNGEMLIA
ATQDFITGGYLLTQKDEFLTKEQVMQLAACLLAGPDANIMLDIPTPAILKPRRLWTGKQI
FNLLLRPNKDDPVMVNLETRGKNYTNNKDLCVKDSYVVVRNSELMCGSMDKNTLGSGTKS
SIFYVILRDFGKEPSTKAMWRLARMASYFMMNRGFSFGIGDVTPSAKLLEEKQLLLEKGY
EKCNTYINEMKKGTLQCQPGCSPEQTLEAVILKELSSIRELAAKACFRELHPTNSALIMA
QSGSKGSNINISQMIACVGQQAINGKRVPNGFEDRALPHFEKFSKVPAARGFVQNSFYSG
LTPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGSVRNAIGEIVEFI
YGGDGLDPVFMETKTKPVDLVRQMMHLRAKYPCKNEQPLRGDEIISTANKILETEEFKEA
RSDFKKESLEFLEKYGKRLTSLQNSYSGCKSPVVKQIERTTAGQVEKFLESVRDKYNLAV
TEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINASKMISTPVIT
AEIILKHDMEYARKIKARIEKTTLGEVSSYIEEVYKPTDCFLVIKLDLDRIRVLGLEVNA
ETIQYSICTSKLRLKPQNVMVYSQSLILVRPDSVKHGHALNAELSRLVNAIPNVVIAGLP
NVSRAVIAVDDQTKPESYKLCVEGTGLGQVMATYGVIGHKTRSNNIWEVYQTLGIEAART
TIMNEITDVMEGHGMTVDHRHIMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTA
DHLFDAAYYGQTDAVDGVSERIILGMPASIGTGIFKLMHNHDKYELEPPLEPIFA
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaacaatttcgtgaagctgacgtaattaagaaaatatcacacgtacaattc
ggaattgatagtccagaggagattcaacaagaggcgcacattaggattgtatcaaagaat
ctatacaatgatggacgacagccaatggcattcggtgttttggatcgacgtatgggtgta
agccaaaaagatgcacagtgtgtgacttgcaaccaaggattgaatgaatgtgtcggacat
tttggatatttagacttggcattgccagtttatcatgttggtcattttcgttcaaccatt
caaattctacaggccatttgcaagacctgcgctcgtgtgatgttaaaagatgccgataag
caagtgtatggccgacgcttattaaaccaaaatctgtcatacttggcgaagaagtcgata
acagctcaaatattggccaaagccaaaaaacatacaaaatgtccgaattgcagtgcaatc
aatgggccggtaaagaagggtcccggtttgatgaaaatttggcacgaaccatttcgtgga
aagaaaacgaccgatcccatcatgcaagaacatttgcatgaattgcaagatgcaacatca
cgaaatcgagaattggcctcaatgattggaccgagttcaatgatctgcgaaatgaatcca
ttgcaggtgttggatttgttcaagagaattccaaaatcagatgtgccattacttggcatg
acgtcgcctgattcaaatccagcaaatttgatagtgacacgagtctttgtaccgcccgta
tgcattcggccaagcgttgtgtcggaaattaaagcgggaaccactgaagatgacctgaca
atgaaacaaagcgaaattttattgatcaatgatgtaatcaacaaacatatgaccagcggc
cataaaattgaacaagttcaagaagattgggattttttacaattacacgtttcattatat
tttaatagcgaggtgtccggtattccaatgacaatgttgcccagacaatcgtctcgcggt
atagttcaacgtttgaaaggtaaacaaggtcgtttccgtggtaatttatcgggaaaacgt
gtcgatttctctggccgaactgttatctcacccgatccaaatctgatgattcatcaagtg
ggtgtgcccgaacgtgtggccaaaattctaacatatcccgaacgagtcaatgatgcaaat
ctacagcgaatgaagcaactcgttcgaaacggcactgaaaagcatccgggcgcaaattat
gttcaacaaaaaggattgtcattcaaaaaatacttggcctatggtaatcgagagaaagtc
gctcaagacttgaagcgtggcgatattgttgagcgtcatcttaccgatggcgatattgtt
ctgtttaatcgtcaaccaagtttacacaaaatgagtatcatgtcacatcaggccaaagtt
caaccgcaacgaacgtttcgatttaatgagtgcgtttgtacgccatacaatgctgatttt
gacggtgatgagatgaatttgcatcttccacaaaccgaagaggctcgggctgaagcactc
gttttaatgggcaatcaatcgaatttggtcacaccgaaaaacggtgaaatgctcattgca
gccacacaagatttcattacgggcggctatttactcacacaaaaggatgaatttttgaca
aaagaacaagtgatgcaactcgcagcttgtttgttagccggacctgatgcgaatattatg
cttgatattccgacacctgccattttgaaaccgagacgactttggacggggaaacaaatt
ttcaacttactgcttcggccaaacaaagacgatcctgttatggtcaatctcgagactaga
ggcaaaaattacacaaataacaaagatttgtgtgttaaagattcgtatgtggtcgttcgt
aattcggaactgatgtgcggttccatggacaaaaatactttgggttcaggaacaaaaagt
agtattttctacgtaattttaagagattttggaaaagaaccgtcaacaaaggcgatgtgg
cgtttggcacggatggcatcttatttcatgatgaaccgtggtttctcctttggcattggt
gatgtaacgccaagtgcaaaattgctcgaagaaaagcaattgctcctggaaaaaggttat
gagaaatgtaacacatacatcaacgaaatgaaaaaaggaacattacaatgtcagcctggt
tgcagtccggagcaaactctcgaagcggtcattttaaaagaattgtccagtattcgtgag
ctggcggcgaaagcgtgttttcgtgaattgcatccgacaaacagtgcattgattatggcc
cagtctggttcaaaaggttcaaacatcaatatatctcaaatgattgcttgtgtgggccaa
caggccatcaatggtaaacgtgtaccgaatggttttgaagatcgtgcattgccacatttt
gaaaaattctccaaagtgccagcggctcgtggtttcgtacaaaatagtttctattccggt
ttaacaccgaccgaattttttttccacacaatggccggccgtgaaggtttagtcgatacc
gctgtcaaaacagcggaaacaggttatttgcaacgtcgtttggtaaaatgtttggaagat
ttggtcgttcattatgatggttccgttcgaaatgcgatcggtgaaattgttgaatttatt
tatggcggtgatggtttggatccagtttttatggaaacaaaaacaaaaccggttgacctg
gtgcgtcaaatgatgcatttacgtgcaaaatatccatgtaaaaatgagcaaccgttgcgt
ggcgatgaaatcatttcaaccgccaataaaatacttgagactgaagaattcaaagaggca
cgcagcgattttaagaaagaatcattggaatttttggaaaaatatggaaaacgtttgaca
tcattacaaaattcgtatagtggatgcaaatcaccggtggtgaaacaaattgaaagaaca
accgctgggcaagtggaaaaatttctagaatccgttcgagataaatacaatttagcggta
acggaaccgggcacagctgttggagctttggcagctcaatctatcggtgaacccggaaca
cagatgacattgaaaactttccattttgctggtgtcgcttcaatgaacatcacacaggga
gtgccacgtattgtggaaattataaatgccagcaaaatgatatcaacgccggtcatcacc
gcagagattatactcaagcatgacatggaatatgcacgaaaaattaaagcacgcattgag
aagaccaccttgggagaggtttcatcttacattgaagaagtttacaaaccaaccgattgc
tttttagtcatcaaacttgatttggatcgtattcgggtgttaggtcttgaggtcaacgct
gaaaccattcaatattcaatttgcacctcaaaactccgcctcaagccacaaaatgtgatg
gtctacagtcagtcgttgattttggttcgcccagattcggtgaaacacggtcatgctttg
aatgctgagctgtctcgtttagtcaatgcaattccaaatgttgtgattgctggtcttccg
aatgtttcacgtgccgtaattgctgttgatgaccaaaccaaaccggaaagctataagctc
tgtgttgaaggaactgggttgggacaagtaatggcgacgtacggtgttattggccataag
actaggagcaataacatttgggaggtgtatcaaactttgggtattgaagcggctcgaaca
accatcatgaatgaaatcaccgatgtgatggaaggtcacggtatgacagtcgatcacaga
cacattatgcttttggccagtcaaatgacaagtcgcggtgaagtgcttggtatcactcgg
catggattggccaaaatgagagaatcagttttcaatttggcatcgttcgaaaaaacagcc
gaccatctcttcgatgcggcctactatggtcaaaccgacgctgtagacggtgtatcggag
cgtattattttgggaatgccagcgtcaatcggtactggaatatttaagcttatgcataat
cacgataaatacgagttggaaccacccctcgagccgatttttgcttaa
DBGET
integrated database retrieval system
