KEGG   Contarinia nasturtii (swede midge): 116352289
Entry
116352289         CDS       T08003                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03020  RNA polymerase
cns03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116352289
  09124 Replication and repair
   03420 Nucleotide excision repair
    116352289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cns03021]
    116352289
   03400 DNA repair and recombination proteins [BR:cns03400]
    116352289
Transcription machinery [BR:cns03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116352289
DNA repair and recombination proteins [BR:cns03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116352289
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_ribbon_recom Ogr_Delta CpXC DZR Zn_Tnp_IS1595 TF_Zn_Ribbon zf-C4_Topoisom zf-ribbon_3
Other DBs
NCBI-GeneID: 116352289
NCBI-ProteinID: XP_031640632
LinkDB
Position
Unknown
AA seq 128 aa
MSHGYDAHDDGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNK
IMHEIDELTHIVPDVISDPTLPRTEDHACPKCGHREAVFFQAQTRRAEEEMRLYYVCTNP
NCTHRWTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtctcatggttacgatgcacatgacgatggccccggttttgtcggcattcgtttctgt
caggaatgcaataatatgttgtatccgaaagaagacaaagagaataaaatactattgtat
gcgtgccgaaattgtgactataaacaagaagctgactcaaattgtatttatgtgaacaaa
attatgcacgaaatcgatgaattaacacacattgtgccagacgttatatcagatccaacg
ttgccccgtacagaagatcatgcctgtccaaaatgtggccatagagaggctgtctttttc
caagcacaaacacgacgagccgaagaagaaatgagattgtactatgtgtgcacaaatcca
aactgtacacatcgatggactgaatag

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