Caldicellulosiruptor obsidiansis: COB47_1008
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Entry
COB47_1008 CDS
T01293
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00730
Thiamine metabolism
cob01100
Metabolic pathways
cob01240
Biosynthesis of cofactors
cob04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
COB47_1008
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
COB47_1008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cob03016
]
COB47_1008
Enzymes [BR:
cob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
COB47_1008
Transfer RNA biogenesis [BR:
cob03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
COB47_1008
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ADL42309
UniProt:
D9TJX7
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All DBs
Position
1122794..1123972
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AA seq
392 aa
AA seq
DB search
MKAILVRYGELALKGQNRPFFEDTLVRNIKKRLSDFDSVTVKKEQGRIFVENLSEEYFDE
AIERLKRVFGIVGITICEVAEKNLEEIKQAAEVVTKNELENGKKTFKVETKRADKKFDLK
SPEVSKLIGAHILRKFAEMYGLCVDVHNPDFILNIEIRDKVYVYSSEEKGIGGMPLGTGG
RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFYSFPYTGEKAKEKVIDLCKVLAKYTDKIK
LYIVPFTEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGLALITGESIGQVASQTM
ESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGTYDISILPYEDCCTVFVPKHPKTKPK
LEEVLAEEIKLKTEELIENAVINTEWMVIRDR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaatattggtaagatacggtgaacttgcattaaaaggtcaaaatcgacctttt
tttgaagatacgctggtcaggaatatcaaaaaaagactttctgattttgattcagttacg
gttaaaaaagagcagggcaggatttttgttgaaaatttgagtgaagaatattttgatgaa
gctattgaaaggctcaaacgcgtttttgggattgtaggaattaccatatgcgaggttgct
gaaaagaatttagaggaaataaaacaggctgctgaagttgttaccaaaaatgagcttgaa
aatggtaagaagacttttaaggtggagactaaacgagcagataagaaatttgatctaaag
tctccagaggtatctaagttgataggtgcgcatatcttgagaaagtttgctgagatgtac
ggactttgtgttgacgttcacaaccctgattttattttgaacattgaaataagagacaaa
gtgtatgtctattcgtcagaggaaaaaggtattggaggaatgccgcttggcacaggtggc
agggcgcacctacttttgtccggtggtatagacagtcctgttgccggttttatgattgcc
aaaagaggtgttgagatagaagcaattcacttttacagttttccttacactggcgagaaa
gcaaaggaaaaggtaatagacttgtgtaaggttttggcaaaatacacagacaagataaag
ctctatatagttccatttactgaaattcagctttctatttatgaaaattgtgatgagagg
ttcttgacaataataatgagaaggttcatgatgaagattgcacagaagattgccatgcaa
aatggtggactagctttgattaccggtgagagtataggtcaggttgcaagccagacaatg
gaaagcctgttttgtacgcaggcagctgtgtcaatgccggttttcagaccgctcattggc
atggacaaggaagaaataataagacttgcaaagaagatagggacatatgatatctctata
cttccttatgaagactgctgtactgtgtttgttcctaagcatccaaaaactaaaccaaag
cttgaagaggttttagctgaggaaatcaagctcaagacagaagaattgattgaaaatgca
gtaataaataccgagtggatggtgataagagataggtga
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