Cobetia sp. 4B: H2O77_02560
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Entry
H2O77_02560 CDS
T09692
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00020
Citrate cycle (TCA cycle)
cobb00640
Propanoate metabolism
cobb00660
C5-Branched dibasic acid metabolism
cobb01100
Metabolic pathways
cobb01110
Biosynthesis of secondary metabolites
cobb01120
Microbial metabolism in diverse environments
cobb01200
Carbon metabolism
Module
cobb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cobb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
H2O77_02560 (sucD)
00640 Propanoate metabolism
H2O77_02560 (sucD)
00660 C5-Branched dibasic acid metabolism
H2O77_02560 (sucD)
Enzymes [BR:
cobb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
H2O77_02560 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QWN37408
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All DBs
Position
598932..599804
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGGQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLGLPVFNTVAEA
VAETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGVPTLDMLEVKVKCDELGARVI
GPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDHGFGQSSCVGIGG
DPIPGSNFIDILEMFEKDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAQIGDAIKEVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttgatcgacaagaacaccaaggtgatctgccagggcttcactggcggccag
ggtaccttccactctgaacaagccatcgcctacggcaccaagatggtcggtggcgtgacg
ccgggcaagggtggtcagactcacctgggcctgccggtgttcaacaccgtcgccgaagcc
gttgccgagactggcgctgaagcgtccgtcatctacgtgccggcaccgttctgcaaggat
tccatccttgaagcggccaatgcaggcatcaagctgatcgtctgcatcaccgaaggcgtg
ccgactctcgacatgctggaagtcaaggtcaagtgcgacgagctgggcgcgcgcgtcatc
ggtccgaactgcccgggtgtcatcactccgggtgagtgcaagatcggtatcatgccgggt
cacatccaccagccgggcaaggtcggtatcgtgtctcgttccggcaccctgacctacgaa
gccgtcaagcagaccactgaccacggtttcggtcagtccagctgtgtcggcatcggcggc
gacccgattccgggttccaacttcatcgacatcctcgagatgttcgagaaggacccgaag
accgaagccatcgtcatgatcggcgagatcggcggttctgctgaagaagaagccgctgcc
tacatcaaggcgaacgtcaccaagccggtcgtctcctacatcgctggtgtgactgcgcct
ccgggcaagcgcatgggccatgcaggcgccatcatctccggcggcaagggtactgccgac
gagaagttcgcggctctggaagcggctggcgtcaagactgtgcgttcactcgcgcagatc
ggcgatgccatcaaggaagtcactggctggtaa
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