Cobetia sp. AM6: CLAM6_04580
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Entry
CLAM6_04580 CDS
T08724
Symbol
soxB
Name
(GenBank) sarcosine oxidase subunit beta
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00260
Glycine, serine and threonine metabolism
cobe01100
Metabolic pathways
Module
cobe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLAM6_04580 (soxB)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CLAM6_04580 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CLAM6_04580 (soxB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Thi4
NAD_binding_8
FAD_binding_2
FAD_oxidored
Pyr_redox_3
Pyr_redox_2
NAD_binding_9
FAD_binding_3
Rhodanese
MCRA
Motif
Other DBs
NCBI-ProteinID:
BBO55147
UniProt:
A0A5K7Y3J6
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All DBs
Position
527324..528574
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AA seq
416 aa
AA seq
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MQRYSGFGLVKHALSHHENWQKVWRSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNV
AVIEKGWLGGGNTARNTTLVRSNYLWDEAAALYEHSMKLWEGLSQDLNYNVMFSQRGVLN
LGHTLQDMRDIQRRVNANRLQGIDGEVLDAQQVQELVPAMDCSSRARYPILGASWQPRGG
VARHDAVAWGFARGADSLGVDLIQQTEVTGFRKQDGAIVGVETSRGFIGAKRVGVVTAGN
SGVMAEKAGFRLPLESHPLQALVSEPLKPILDTVVMSNHVHGYVSQSDKGDLVIGAGIDG
YVGYGQRGSYPTIEHTLQAIVEMFPIFSRVRMNRQWGGIVDTCPDACPIISKTPVKGLYF
NCGWGTGGFKATPGSGNVFAWTLAKGRTHPLAEPFSYDRFNTGKLIDEHGAAGVAH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttactcgggattcgggctggtcaagcatgcgctcagccaccatgagaactgg
cagaaggtctggcgtagtccagaacccaagaaggaatacgacgtcgtcatcgtcggtggc
ggcgggcatggtctggccacggcctactatctggccaaggagcacggcatcaccaatgtc
gcggtgatcgagaagggctggttgggcggcggcaataccgcgcgcaacaccaccctggtg
cgctccaactatctgtgggatgaggcggcggcgctctacgagcactccatgaagctgtgg
gaaggcctgtcccaggatctcaactacaacgtgatgttctcccagcgtggcgtgctcaac
ctgggccacaccctgcaggacatgcgtgacatccagcggcgcgtgaatgccaaccgtctg
cagggcatcgatggcgaagtgctggatgctcagcaggtgcaggaactggtgccggcgatg
gactgctcgagccgcgcacgctacccgattctcggcgcctcctggcagccgcgcggtggc
gtggcacgtcacgacgccgtggcctggggcttcgcgcgcggtgccgacagcctcggcgtc
gacctgatccagcagaccgaagtcactggcttccgcaagcaggatggcgccatcgtcggg
gtggaaacctcacgcggcttcatcggtgccaagcgtgtcggcgtggtcaccgccggcaac
tccggggtgatggccgagaaggccggcttccgcctgccgctggaatcccacccgctgcag
gcgctggtctccgagccgctcaagccgattctcgacaccgtggtgatgtccaaccacgtc
cacggttatgtcagccagtcggacaagggcgacctggtcatcggtgccggcatcgacggc
tacgtgggctacggccagcgtggcagctacccgaccatcgagcacaccctgcaggccatc
gtcgagatgttcccgatcttctcgcgggtacgcatgaaccgtcagtggggcggcatcgtc
gacacctgcccggacgcctgtccgatcatttccaagacgcccgtgaaggggctctatttc
aactgcggttgggggaccggtggcttcaaggccacgccggggtccggcaacgtctttgcc
tggacactggccaaggggcgcacccatccgctggcagaacccttctcctatgaccgtttc
aacacgggcaagctgatcgacgaacacggcgccgctggcgtcgcgcactga
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