Cobetia sp. AM6: CLAM6_05210
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Entry
CLAM6_05210 CDS
T08724
Symbol
sucD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00020
Citrate cycle (TCA cycle)
cobe00640
Propanoate metabolism
cobe00660
C5-Branched dibasic acid metabolism
cobe01100
Metabolic pathways
cobe01110
Biosynthesis of secondary metabolites
cobe01120
Microbial metabolism in diverse environments
cobe01200
Carbon metabolism
Module
cobe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cobe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLAM6_05210 (sucD)
00640 Propanoate metabolism
CLAM6_05210 (sucD)
00660 C5-Branched dibasic acid metabolism
CLAM6_05210 (sucD)
Enzymes [BR:
cobe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CLAM6_05210 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBO55210
UniProt:
A0A5K7XZA8
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All DBs
Position
620648..621520
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGGQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLGLPVFNTVAEA
VAETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGVPTLDMLEVKVKCDELGARVI
GPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDHGFGQSSCVGIGG
DPIPGSNFIDILEMFEKDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAQIGDAIKEVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttgatcgacaagaacaccaaggtgatctgccagggcttcactggcggccag
ggtaccttccactctgaacaagccatcgcctacggcaccaagatggtcggtggcgtgacg
ccgggcaagggtggtcagactcacctgggcctgccggtgttcaacaccgtcgccgaagcc
gttgccgagactggcgctgaagcgtccgtcatctacgtgccggcaccgttctgcaaggat
tccatccttgaagcggccaatgcaggcatcaagctgatcgtctgcatcaccgaaggcgtg
ccgactctcgacatgctggaagtcaaggtcaagtgcgacgagctgggcgcgcgcgtcatc
ggtccgaactgcccgggtgtcatcactccgggtgagtgcaagatcggtatcatgccgggt
cacatccaccagccgggcaaggtcggtatcgtgtctcgttccggcaccctgacctacgaa
gccgtcaagcagaccactgaccacggtttcggtcagtccagctgtgtcggcatcggcggc
gacccgatcccgggttccaacttcatcgacatcctcgagatgttcgagaaggacccgaag
accgaagccatcgtcatgatcggcgagatcggcggttctgctgaagaagaagcggctgcc
tacatcaaggcgaacgtcaccaagccggtcgtctcctacatcgctggtgtgactgcgcct
ccgggcaagcgcatgggccatgcaggcgccatcatctccggcggcaagggtactgccgac
gagaagttcgcggctctggaagcagctggcgtcaagactgtgcgttcactcgcgcagatc
ggcgatgccatcaaggaagtcactggctggtaa
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