Cobetia sp. AM6: CLAM6_16120
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Entry
CLAM6_16120 CDS
T08724
Symbol
xdhA
Name
(GenBank) xanthine dehydrogenase
KO
K13481
xanthine dehydrogenase small subunit [EC:
1.17.1.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00230
Purine metabolism
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
cobe01232
Nucleotide metabolism
Module
cobe_M00958
Adenine ribonucleotide degradation, AMP => Urate
cobe_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CLAM6_16120 (xdhA)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
CLAM6_16120 (xdhA)
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GFIT
Motif
Pfam:
FAD_binding_5
Fer2_2
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-ProteinID:
BBO56301
UniProt:
A0A5K7Y3V3
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All DBs
Position
complement(1920741..1922270)
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AA seq
509 aa
AA seq
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MIDFTLNGRACRLPTPAPGTSVLEVLRTSLGQDGTKEGCASGDCGACTIALQGPGHNVST
ANACLMPAHQLAGCDLITVEGLADASQAPTLSAVQQALVSTHASQCGFCTPGIAMSLAVL
HARHQRQIDQGEVIDARQRDTMIDHALGGNLCRCTGYRPIREAAHRLLQGEFGPACLQDA
GDSTAEAHDTAPDDERDTGRFYRPVTLQALLALRAERSDATLIAGGTDLMLEHTQRLRDF
PALIDTTQVAALGKIEEGEHAGQAGWWIGAAVSYHQLMPLLREHYPDGAELLTRLGSEQI
RHRGTLGGNIGNASPIGDMPPLLITLDAYIQLMSQDNERILKLEDYFLDYKRTQLMPDEI
IHSVFLPRPLPNQRLAVHKLSKRRDDDISTLLGVFAWRRDASGRAQHWRVAFGGMAGVPA
RAPHLEALLTLQALESLTPARLTAQTRQQIEQAVQADFSPLSDVRGSREYRLLAASHLIP
RVAQRILNERQTTTSLTPLESLDAYLAQS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacttcaccttgaacgggcgcgcgtgccgactgcccacacctgcaccgggaacg
agcgtactcgaagtgctgcgcacctcacttgggcaagacggcaccaaggaaggctgtgcc
tccggcgactgcggcgcctgcaccattgccttgcaggggccgggccacaatgtgagcacc
gccaacgcctgcctgatgcccgcccaccagctggccggctgtgacttgatcaccgtcgag
ggtctggcggatgccagccaggcgccaaccctctcggcggtgcagcaggcattggtcagc
acacacgccagccaatgtggcttctgcaccccgggcatcgccatgagccttgcggtgctg
catgcccgtcatcagcgccagatcgatcagggcgaagtgatcgatgcccggcaacgcgac
accatgatcgaccatgcactgggcggcaatctgtgtcgctgcaccggttatcgcccgatc
cgcgaggccgctcaccgtctgctgcaaggcgaattcgggccagcctgcctgcaggacgct
ggcgatagcacagcggaagcgcacgacaccgcccctgatgacgagcgagacaccgggcgt
ttctatcggccggtcaccttgcaggccctgctggcgctgcgcgccgagcgctcggatgcc
acgctgatcgccggtggcacggacctgatgctggagcacacccagcgcctgcgcgacttc
ccggccttgatcgacaccacccaggtcgcggcgcttggcaagatagaggaaggcgagcac
gccggtcaggcaggctggtggatcggggcagcggtcagctatcaccagctgatgccgctg
ctgcgggagcattacccggatggcgcggagctgctcacgcgactgggcagtgaacagatc
cgccatcgtggcaccctgggcggcaatatcggcaatgcctcgcccatcggtgacatgccg
ccgctgctgatcacgctggacgcctatatccagctgatgagccaggacaacgagcgcatc
ctgaagctcgaggactacttcctcgactacaagcgtacccagctgatgccggacgagatc
atccactcggtcttcctgccgcgcccgctgcccaaccagcggctggcggtacacaagctg
tccaagcggcgtgacgatgacatctccaccctgctcggcgtcttcgcctggcggcgtgac
gccagcgggcgcgcccagcactggcgcgtggccttcggcggcatggccggggttccggcc
cgcgccccgcacctggaagcactgctgacgctgcaagcgctggaatctctcactcccgcc
aggctgacggcgcagactcgccagcagatcgagcaggccgtgcaggccgatttctcaccg
ctcagtgacgtgcgcggctcacgcgagtatcgcctgctggccgccagccatctgattccc
cgcgtggcccagcgcatcctgaatgagcgtcagaccacgacttccctcacgccactggag
agcctcgatgcgtaccttgcacagtcttga
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