Capnocytophaga ochracea: Coch_1273
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Entry
Coch_1273 CDS
T00961
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00860
Porphyrin metabolism
coc01100
Metabolic pathways
coc01110
Biosynthesis of secondary metabolites
coc01120
Microbial metabolism in diverse environments
coc01240
Biosynthesis of cofactors
Module
coc_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Coch_1273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
coc04147
]
Coch_1273
Enzymes [BR:
coc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Coch_1273
Exosome [BR:
coc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Coch_1273
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ACU92821
UniProt:
C7M5B8
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All DBs
Position
1482745..1483731
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AA seq
328 aa
AA seq
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MYPLRRNRRLRVNDTVRSLVKETIVTPDDFLVPLFVVEGTGVKEEIASMPGYYRYSLDLL
TKEVKELWSLGLKSVLLFVKVPDALKDNKGVEAANPNGLMQRAIKTVKEAVPQMLVMTDV
ALDPYSIYGHDGIVENGRIVNDATVNALCTMALSHAQAGADFIAPSDMMDGRILALRETL
EDNSFEHVGIMAYSAKYASAFYGPFRDALDSAPVDQQDIPKDKKTYQMDYHNRLEALRET
RMDIEEGADIVMVKPGLCYLDIVREVKNMSEVPVAVYQVSGEYAMLKAAAANGWLDHDAV
MMEQIVSIKRAGADLIASYFAKEVVKLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtatccactgagaagaaaccgccgtttgcgcgtaaacgatacggtacgtagtttggta
aaagaaacgattgttacccccgatgattttcttgtacctctctttgtagttgaaggtact
ggcgtaaaagaagaaatagcctctatgccgggttattaccgttatagcctcgacctatta
acaaaagaagtaaaagagctttggagcttaggactcaaatcggtattactgtttgtgaaa
gtgcctgacgctcttaaagacaacaaaggcgtagaagcagccaaccctaatggcttgatg
caacgcgctattaaaactgtgaaagaagcagtgccccaaatgctcgtaatgactgatgta
gcactcgacccttattccatttatggtcacgatggcattgtggaaaacggacgcattgtg
aacgatgctactgtaaatgctctttgtacaatggcactctcacacgctcaggcaggtgct
gatttcatcgcgcccagcgatatgatggacggacgtatcctcgccttgcgtgaaaccctt
gaagacaatagctttgagcacgtagggataatggcttatagtgccaagtacgcctcagct
ttctacggacctttccgcgatgcactcgacagtgctcccgtagaccaacaggatatccct
aaggataagaaaacttaccaaatggactatcacaaccgcctcgaagctttacgcgaaacc
cgtatggatatagaggaaggtgctgatattgtgatggtaaaaccagggctttgctattta
gacatcgttcgcgaggtgaagaatatgagcgaagtgcccgtggctgtttaccaagtatcg
ggtgaatacgcaatgctgaaagctgctgctgccaacggttggctcgatcacgatgctgta
atgatggaacaaattgtgagcatcaagcgtgctggtgccgaccttatcgctagctatttt
gctaaggaagtcgtaaaacttttatag
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