Corynebacterium pseudotuberculosis 1/06-A: Cp106_0914
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Entry
Cp106_0914 CDS
T02052
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Pathway
cod03030
DNA replication
cod03410
Base excision repair
cod03420
Nucleotide excision repair
cod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cp106_0914 (polA)
03410 Base excision repair
Cp106_0914 (polA)
03420 Nucleotide excision repair
Cp106_0914 (polA)
03440 Homologous recombination
Cp106_0914 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cod03032
]
Cp106_0914 (polA)
03400 DNA repair and recombination proteins [BR:
cod03400
]
Cp106_0914 (polA)
Enzymes [BR:
cod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cp106_0914 (polA)
DNA replication proteins [BR:
cod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cp106_0914 (polA)
DNA repair and recombination proteins [BR:
cod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cp106_0914 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cp106_0914 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_lambd_f
HHH_5
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AER68987
LinkDB
All DBs
Position
968893..971553
Genome browser
AA seq
886 aa
AA seq
DB search
MTSTSNRLMLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSLLNEEKPSHVA
VAFDVGRKTFRTDMFPDYKAQREATPPEFKGQVGLIKDVLEVLGITTLEKENYEADDVIA
TLATAAQPLGFETLIVTGDRDSFQLVNATTTVLYPMRGVSVLHRFTPEAVEEKYGLTPAQ
YPDFAALRGDPSDNLPNIPGVGPKTATKWIVEYGSLDELLERADEVKGKAGTSLRERLEQ
VRMNRTLTEMIKDLELPYSPDQLGLKPVQVAGVAEKFDELEFGTNLRERVMSAVGADTTT
ALTEERAEVTVDQASLKDWLAQHENQGLALFVRGRGTPATGDAEALAIADKQRHVIAVDL
SDIDPQDEKALAQWLRSETPKYLHEAKATFHMLSGRGFELNGVAHDTAIAAYLLRPGQRT
YDLKDVYQRHLQRQLSGDETQGQLSLLDAPDSEELIDSVIAILELAQELTKQLEDIDSFE
LYRDLELPLVLILARMEAAGIAVDVETLEDQLKVFIERVQEHEAAARNIAGDPSLNLSSP
KQLQVVLFETLGLPKTKKTKTGYSTAAKEIEALAVKHPDPFLDHLLAHRENQKLKTTLEG
LIKAVGSDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTQDGRRIRSAFVVGEGYETLLT
ADYSQIEMRVMAHLSEDPGLIEAYRQGEDLHNYVGSRVFEVPVDQVTPELRRRVKAMSYG
LVYGLSAFGLGQQLNIPAGEAKQIMTSYFERFGGVKQYLDNVVEQARKDGFTSTLFGRRR
YLPELGSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDQELKKAGVVSRVLLQVHDE
LVVEIAPNELEQVREIVEKEMDAAISLRVPLEVSAGSGPNWEVAAH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcaactagcaatcgtttaatgcttatcgacggccactcgatggcgttccgtgcg
ttttatgcgctgccggccgaaaacttttccacatcgggtgggcaagcgaccaacgctgtc
tatggatttttatcgatgctttcttcccttttgaatgaggagaagccgtctcacgtggcg
gtggcctttgacgtcggccggaagacatttcgcacggatatgttccccgattataaggct
cagcgtgaagccacacctcccgagttcaaaggacaagttgggctcattaaggacgtcctt
gaggttttgggaattactaccctggaaaaagagaactacgaggcagatgatgtaattgct
accctggcaactgcggcgcagccactggggtttgagactctcattgtgaccggggatcgt
gactcattccaacttgtcaatgcaaccacgacggttctttatcctatgcgcggggtctcg
gttttacatcgctttactcctgaagccgtggaagaaaaatatggtcttacccctgcgcaa
tatccggactttgcggcattgcgaggcgacccttcagataaccttcccaacattccaggt
gtggggcctaaaacagcaaccaaatggattgtggagtacggcagtcttgatgagctgttg
gagcgtgctgatgaagtcaaaggcaaagctggcacgagtttacgcgagcgtttagaacag
gttcggatgaaccgaacgctgactgagatgatcaaagatttagagttgccgtattctccg
gatcaactgggacttaaacctgttcaggtagcaggcgtggcggaaaaatttgatgagctg
gaatttggtaccaacctccgtgaacgtgtgatgagcgcagtaggagctgatacaaccaca
gcactcacggaagaacgcgcggaagtaactgtggaccaggcatctcttaaagattggttg
gctcaacatgaaaatcaaggtcttgcattatttgtacgtgggcgaggtaccccagcgact
ggagatgctgaagccttagctatcgcagataaacaacgccatgtaattgcggttgatctt
tcggatattgacccgcaagatgaaaaagctctggcgcaatggctgagaagtgagactccc
aagtatttgcatgaagcaaaagcaactttccatatgctctctggccgaggatttgagctt
aatggggttgcccacgatacggctattgcggcttatctgcttaggccagggcaacgaacc
tatgatttgaaagacgtttatcagcggcatcttcagcgccagctatctggagacgaaact
cagggacagctttcgcttctcgacgcccccgactctgaagagcttattgattctgtcatt
gcgatccttgagcttgcacaggaactaaccaagcagctggaagatatcgattcttttgag
ctctatcgtgatcttgaattaccgttggtcttgattcttgcgcgtatggaagccgcaggt
atcgcggttgacgtggaaaccctagaagaccagttaaaagtttttattgagagagtccaa
gagcatgaagcggctgcccgaaatattgcgggcgacccatccttaaatctttctagccct
aaacaactccaagttgttctttttgaaaccctggggttgcctaaaaccaagaagacaaaa
acggggtattccacagcagctaaagagattgaggcattggctgtgaaacacccagatcct
ttcctcgaccatctgctcgcgcaccgcgagaatcagaaactgaaaacaactcttgaaggt
ttgattaaggcagtcgggtcggatggccgtatccataccacttttaatcagactgttgcg
tctactggacgtctaagctcaacagaacctaatcttcaaaacattccagttcgcacacaa
gatggcagaagaattagatcggcattcgttgtaggcgaaggctatgaaacgctgctcacc
gcagattactctcagattgagatgcgcgtcatggcacatctttcggaggacccgggtctt
atcgaggcttaccgtcagggggaagatctccataactacgttggatccagagtctttgag
gttccggtggatcaggtaacaccagagctgcgtcgacgagtaaaagcgatgagttatggc
ctggtctatggcctctcagcctttggcctggggcaacagttgaatattcctgccggtgag
gctaaacagattatgacgagctacttcgagcgttttggtggggtgaaacagtatctggat
aatgtggtggaacaagcacggaaagatggttttacctctacattatttggcagacgccga
taccttccagagctcggctcagataatcgtgtggctcgtgaaaatgcagaacgtgctgcg
cttaatgcccctatccagggaacagcggcggatattattaaggtcgcaatgattcgtgtt
gaccaagagttgaaaaaagctggggttgtctctcgtgtgttgctgcaagttcacgatgaa
ctggtggtggaaatcgcaccaaacgagcttgagcaagtgcgtgagatagtagaaaaggaa
atggatgcagccatttccttacgcgtaccacttgaagtctcagcaggtagtggtcccaac
tgggaagtcgccgcgcactag
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