KEGG   Comamonas odontotermitis: LAD35_04775
Entry
LAD35_04775       CDS       T07833                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
codo  Comamonas odontotermitis
Pathway
codo00740  Riboflavin metabolism
codo01100  Metabolic pathways
codo01110  Biosynthesis of secondary metabolites
codo01240  Biosynthesis of cofactors
codo02024  Quorum sensing
Module
codo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:codo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LAD35_04775 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LAD35_04775 (ribD)
Enzymes [BR:codo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LAD35_04775 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LAD35_04775 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UBB18996
LinkDB
Position
complement(1024301..1025398)
AA seq 365 aa
MHRALDLAGSALFLTSPNPRVGCVLVDGQGRVIGEGHTQRAGGPHAEVMALRDAAARGHG
THGATAYVTLEPCSHHGRTGPCCDALVAAGITKVVAAVADPNPLVVGNGFARLRAAGVAV
EVCDAQNGGSASRDLNIGFFSRMVRKTPWVRLKAAMSLDGKTALADGSSQWITGEAARAD
GHHWRARACTILTGIGTVLADDPALDVRYIDTPRQPRLVVLDSQLRTPPTARIFAASRQM
LIYCAQEDAGRRAALEAAGAVVVCLPAANAAGIDLPALMRDLGQREVNELHVEAGGLLNG
ALLQAGLVDELVLYQAPVLLGQGQDAFGGMALAQLQDAPQLEMVESTTIGADQRIVARLS
GHYDF
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcacagggcgctggatctggctggcagcgcacttttcctgacctctcccaatccacgt
gtaggttgcgtactggtggatgggcaaggccgcgtcattggagagggccacacccagcgg
gctggaggcccgcatgccgaagtgatggcgctgcgggatgcggctgcgcgcgggcatggc
acccatggcgcaacggcctatgtgacgctggagccctgttcacaccacgggcgcaccggg
ccctgctgtgatgccttggtcgctgccggcatcaccaaggtagtggcggctgtggcagac
ccgaaccccctggtggtgggcaacggctttgcacgattgcgcgctgcgggtgtggctgtg
gaagtgtgcgacgcgcagaacggcgggtcggcgtcacgcgacttgaacattggctttttc
agccgcatggtgcgcaagactccgtgggtacggctcaaggctgccatgtcgctggatggg
aagacggccttggccgacggcagcagccagtggatcacgggcgaggcagcgcgtgcggac
ggtcaccattggcgcgcccgcgcctgcaccatcctcaccggcattggcaccgtgcttgca
gatgaccccgctttggatgtccgttatatcgatacgccgcgccagccacgcctggtggtg
ctggacagccagttgcgcacgccaccaacggcccgcatctttgcagcctcacgccagatg
ctgatctattgtgcgcaggaggatgctgggcgccgggctgcactggaagccgccggtgca
gtggtggtctgcctgcctgcagccaatgccgcaggcattgatctgcccgctctgatgcgt
gatctgggccagcgagaggtgaacgagttgcatgtagaagctggcggccttctgaatggc
gccttgctgcaggccgggctggtggacgagctggtgctgtaccaggcccctgtgctactg
ggccaaggccaggatgcctttggcggcatggctttggcacagttacaagatgcgccgcag
ctggagatggtggagagcaccaccatcggagccgaccaacgcattgtcgcccgcctctcc
ggccactatgatttttga

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