Comamonas odontotermitis: LAD35_12025
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Entry
LAD35_12025 CDS
T07833
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00910
Nitrogen metabolism
codo01100
Metabolic pathways
codo01120
Microbial metabolism in diverse environments
Module
codo_M00531
Assimilatory nitrate reduction, nitrate => ammonia
codo_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LAD35_12025 (nirB)
Enzymes [BR:
codo01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
LAD35_12025 (nirB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
AlaDh_PNT_C
GIDA
3HCDH_N
NAD_binding_7
NAD_binding_8
Trp_halogenase
FAD_binding_3
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UBB15601
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Position
complement(2577769..2580237)
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AA seq
822 aa
AA seq
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MKKSKLVMIGNGMAGVRALEELLAIAPDLYDITVFGAEPHPNYNRILLSPVLAGEQTLSD
IVLNDWAWYQDHHILLHAGYTVTAVDRARRTVHAVNAQGEEASAGYDRLIMATGSNPFIL
PIPGKDLLGVLAYRDIADTEAMIEAAKTLRHAVVIGGGLLGLEAANGLMKRGMQVTVVHV
GDWLMERQLDDRAGQMLQQSLSERGMQFCMHAQTQELLGDASGRVRAVRFKDGSEIPADL
VVMAVGIRPNTGLAESMHLHVNRGIVVSDTLQTVTDPRIYAVGECAAHRGTAYGLVAPLF
EQGKVLANHLAEFGIGRYLGSLTSTKLKVTGIDLFSAGDFQGGGDTEEILMSDPYAGVYK
KLVIKDDKLVGACLYGDTVDGSWYFKLLREGRSVADIRDKLMFGESNLGDTGHQGQNKAA
AMADGDEVCGCNGVTKGAICKAIKEKGLFTLEEVRKRTKASASCGSCTGLVEQIIMFTAG
GDYSASPKTKAMCGCTDHGHQAVRDAIREHRLLTTDAVYRFMEWRTPNGCASCRPAVNYY
LISTWPKEARDDPQSRFINERSHANIQKDGTYSVIPRMWGGETTADELRRIADVVDKYQI
PTVKVTGGQRIDLLGVKKEDLQGVWNDIGMPCGHAYAKALRTVKTCVGSEWCRMGTQDST
QMGKDLERAMWRMYAPHKVKFAVSGCPRNCAESGIKDVGIIGVDSGWEMYVGGNGGIKTE
VAHFFTKLKTADEVMEYTGAFMQLYRLEGWYLERTVHYINRVGLDYVKKRILDDAEGRKV
LWEQLQFALEGEPDPWFETDKAAVDVRQFQPLTAAQTARDSA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccaaactggtcatgattggcaacggaatggcgggcgtacgcgcgctggaa
gagttgctggccattgctcccgatctgtacgacatcacggtgtttggcgccgagccgcat
cccaactacaaccgaatcctgctgtcgccggtgctggccggggagcagacgctcagcgat
atcgtgctcaatgactgggcatggtaccaggaccatcacatcctgctgcacgcaggctat
accgtgacagccgtggaccgtgcccgccgtacggtgcatgcggtcaatgcccagggcgaa
gaagccagtgctggctacgatcgcctgatcatggcaacgggctccaacccttttattctg
cccattcccggcaaggacctgctgggtgtactggcctaccgggacattgccgacaccgag
gccatgatcgaggcggcaaagacactcaggcatgcggtggtgatcggtggtggcctgctc
ggactggaggccgcgaacggtctgatgaaacgcggcatgcaggtgacggttgtgcatgtg
ggggattggctgatggagcgccagcttgacgatcgggccggccagatgctgcagcaatcg
ctctccgagcgaggcatgcagttctgcatgcatgcgcagacgcaggaattgctgggtgac
gccagcggccgcgtgcgcgcggtgcgcttcaaggatggcagcgagattccggctgatctg
gtcgtcatggccgtcggcatacgtcccaacacggggctggctgaatccatgcatctgcat
gtgaatcgcggcattgtggtcagcgacacgctgcagactgtgaccgacccgcgcatctac
gcagtgggcgaatgtgctgcgcaccgggggactgcctatgggctggtggcgccgctgttt
gaacagggcaaggtgctggccaaccatctggccgaattcggcatcggccgctatctgggg
tcgctgacctcgaccaagctcaaggtcacgggcatcgacctgttctcggcaggcgatttc
cagggcggaggcgatactgaagagattctgatgagcgacccctatgcgggagtctacaaa
aagctggtcatcaaggatgacaagctggtcggcgcctgcctgtatggcgatacggtggat
ggcagctggtatttcaagctgctgcgcgaaggccgcagcgtggccgatatccgcgacaag
ctgatgtttggcgaatccaatctgggagataccggccaccagggccagaacaaggccgcg
gccatggccgatggcgacgaggtgtgcggctgcaacggcgtgaccaagggagccatctgc
aaggccatcaaggaaaaaggcctgttcacgctggaagaggtgcgcaagcgcaccaaggcc
agtgccagctgcggctcctgcaccgggctggtggagcagatcatcatgttcacggccggc
ggcgactattccgcatcgcccaagaccaaggccatgtgcggttgtaccgaccacggccac
caagccgtgcgcgacgcgattcgtgagcacaggctgttgactaccgatgccgtgtaccgc
ttcatggaatggcgcacgcccaatggctgcgcctcgtgtcgcccggctgtcaactactat
ctgatcagcacctggcccaaggaggcaagggacgacccgcaaagccgtttcatcaacgag
cgcagccacgccaatattcagaaggacggtacgtacagtgtgattccgcgcatgtggggc
ggtgagaccacggctgacgagttgcgccgcattgccgatgtggtggacaaataccagata
cctaccgtgaaggtgacgggcggccagcgcatcgacttgctgggggtgaagaaagaagac
ctgcagggcgtgtggaacgatatcggcatgccttgcggccatgcctatgccaaggcgctg
cgcacggtcaagacctgcgtgggcagcgaatggtgccgtatgggcacgcaggacagcacc
cagatgggcaaggacctggagcgtgccatgtggcgcatgtacgcacctcacaaggtgaag
ttcgccgtcagcggctgcccacgcaactgcgcggagtccggcatcaaggacgtaggcatc
atcggcgtggactcgggttgggagatgtacgtgggcggcaacggcggcatcaagaccgag
gtcgcgcacttcttcaccaagctcaagactgccgacgaggtgatggagtacaccggtgca
ttcatgcagctgtatcgcctggaaggctggtacctggagcgcaccgtgcactacatcaac
cgcgtgggtctggactatgtgaaaaagcgcattctggatgatgccgaaggccgcaaggtg
ctgtgggagcaactgcagttcgccctggagggcgagcccgatccctggttcgagaccgac
aaggcagccgtggatgtgcggcagttccagccattgacggctgcacaaacggcaagagac
agcgcctga
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