Comamonas odontotermitis: LAD35_12090
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Entry
LAD35_12090 CDS
T07833
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00907
Pinene, camphor and geraniol degradation
codo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LAD35_12090
Enzymes [BR:
codo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
LAD35_12090
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
DUF3182
GCV_H
HlyD_D23
RnfC_N
Ntox43
ATPgrasp_ST
DUF2118
Motif
Other DBs
NCBI-ProteinID:
UBB15613
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Position
2593486..2595516
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AA seq
676 aa
AA seq
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MSVTKQIRPFHSVLIANRGEIALRIIQSARLLGFRTVAIYSDADRDSPHVQAADAAVCVG
AALPRESYLNIEAILAAAQQAGADAVHPGYGFLAENEDFANAVDQAGLVFIGPTGAAIKA
MGNKAHAKQLMMQANMPCIPGYQGADQADAAFVAAAQQMGYPVMVKAAAGGGGRGMRLVQ
TAADLPSALASARSEALQAFGSAELILEKAILAPRHIEIQLLADSHGHCIHLGERDCSIQ
RRHQKVIEEAPSTAVTPEIRQRMGDAAVKAAQAIGYIGAGTMEFLLDAHGDFFFMEMNTR
LQVEHAVTEAITGLDLVAWQLRIAAGEALDLQQSDIGIHGHAIEARLTAEDVAAGFLPQT
GKVLYWQAPNAATPASLATHLQPLEVRVEQALRSGCTISPYYDSMIAKVVVHGSNREEAR
RKLVAALQNCVLLGVPSNQHFLVECLRSPQFTQGKDIHTGFVQQYMGHCLAAPPVACARS
LAFAALALLARAPSSSHLQHSPSVLELAVGQQRWRAEVQAMGDAWKISLNASEAQAGADA
LVFLLRDLRWFDAEHQHFQVECNGLVEKAIAVRDGLQLELFHAGQAWHIEQADAHKSSHA
VQSGGAVTAPLTGRVAAVVVELGQTVSQGQPLAVLEAMKMEHSLTAPIAGRVVELHASPN
TQATKGSLLLRIEELA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaccaaacaaatccgtccctttcacagcgtgctcatcgccaaccggggcgag
attgcactgcgtatcattcagtccgcacgcctgctgggttttcgcacggtggccatttat
tccgacgccgaccgcgacagcccccatgtgcaagcagctgatgccgctgtctgcgtgggc
gctgcactgccgcgtgagagttacctgaacatcgaagccattctggccgcggcccaacag
gcgggagccgatgcggtccatccgggctacggctttctggccgagaacgaagacttcgcc
aacgccgtagaccaggctggcctggtctttatcggcccgaccggcgcagccatcaaggcc
atgggcaacaaagcccacgccaagcagttgatgatgcaagcgaatatgccctgcattccc
ggctaccagggtgccgaccaggcagatgccgcctttgttgcagcggctcagcagatgggc
tatcccgtcatggtcaaggcggcggcaggtggcggcggccggggcatgcgcctcgttcaa
acggcagcagatctgccaagcgctctggcatcggcacgctccgaggctttgcaggccttt
ggcagcgcagaactgattctggagaaggccattctggccccgcgccacatcgagatccag
ctgctggccgacagccacggccattgcatccatctgggcgagcgcgactgttccatccag
cgccgccaccagaaggtgatcgaagaagcaccctccaccgcagtcaccccagagatacgc
cagcgcatgggtgacgctgcggtcaaagccgcccaggcgatcggctacatcggcgccgga
accatggagtttctgctcgatgcccatggcgactttttcttcatggaaatgaacacccgc
ctgcaggttgagcatgcagtgaccgaggccatcaccggcctggatctcgtggcatggcag
ttgcgcatcgctgccggcgaggcactcgacttgcagcaaagcgacatcggcatccacggc
cacgcgattgaagcccgactcacagccgaagatgtggctgcaggctttctgccacagact
ggcaaggtcctgtactggcaagcacccaatgcagccactcctgcttcactggccacgcat
ctgcagcctttggaggtgcgcgtggagcaggcattgcgcagtggctgcaccatcagcccc
tattacgactccatgattgccaaggttgtggtgcatggcagcaaccgcgaagaggcgcgg
cgcaagttggtagccgccttgcagaactgcgtgttgctcggggtacccagcaaccagcat
ttcctggtcgaatgtctgcgcagccctcagttcacccaaggcaaggacatccacacaggc
tttgtgcagcagtatatgggccactgcctggcggctccaccagtggcctgtgctcgcagc
cttgctttcgcagccttggcgctgttggctcgcgccccttccagcagccatctgcaacac
tccccttccgtgctggagctcgccgttggacagcaacgctggcgtgccgaggtacaagcc
atgggtgacgcctggaagatcagcctgaacgcctccgaggcacaagctggtgccgatgca
ctggttttcctcctgcgcgatctgcgctggttcgacgccgagcaccagcacttccaggtg
gagtgcaatggcctggtagaaaaggccatcgccgtgcgcgacgggctgcaactggagctg
ttccatgccggacaggcctggcacatcgagcaagccgatgcacacaaatccagccatgcc
gtgcagagcggcggcgcagttaccgcacctctgaccggccgcgtggctgccgtggtggtg
gagctgggtcagaccgtcagccaaggccaaccactggcggtgctggaggccatgaagatg
gaacacagcttgacggcccccatcgccggccgggtggtggagttgcatgccagccccaac
acccaggccaccaaaggcagcctgttgctgcgcatcgaggagctcgcatga
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